RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PSIP1O75475 530 aaKnown RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 URI1O94763 535 aaPredicted RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 TCN2P20062 427 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 OAS2P29728 719 aaKnown RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 CCNFP41002 786 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 RPS18P62269 152 aaKnown RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 CALCOCO2Q13137 446 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 TTLL9Q3SXZ7 439 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 LINC00303Q3SY05 128 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 TAF1BQ53T94 588 aaPredicted RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 FAM69BQ5VUD6 431 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 DUPD1Q68J44 220 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 FCRL6Q6DN72 434 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 C16orf46Q6P387 395 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 SUSD1Q6UWL2 747 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 CYHR1Q6ZMK1 362 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 ZNF572Q7Z3I7 529 aaPredicted RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 ZSCAN1Q8NBB4 408 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 PPFIBP2Q8ND30 876 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 INPP5DQ92835 1189 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 LRRC39Q96DD0 335 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 SLC45A3Q96JT2 553 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 PKP4Q99569 1192 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 MIPEPQ99797 713 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 ACAT2Q9BWD1 397 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 SPRTNQ9H040 489 aaPredicted RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 SAYSD1Q9NPB0 183 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 WHRNQ9P202 907 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 TRMT6Q9UJA5 497 aaKnown RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 ADAMTS6Q9UKP5 1117 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 BOD1L1Q8NFC6 3051 aa13.12□□□□□ -0.31
SNX3-204ENST00000426155 MDC1Q14676 2089 aaKnown RBP13.12□□□□□ -0.31
SNX3-204ENST00000426155 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 ZNF891A8MT65 544 aaPredicted RBP13.11□□□□□ -0.31
SNX3-204ENST00000426155 H3BMH7 237 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 MYO1CO00159 1063 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 ZNF500O60304 480 aaPredicted RBP13.11□□□□□ -0.31
SNX3-204ENST00000426155 KATNA1O75449 491 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 C1QL1O75973 258 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 SYF2O95926 243 aaKnown RBP13.11□□□□□ -0.31
SNX3-204ENST00000426155 CATP04040 527 aaKnown RBP13.11□□□□□ -0.31
SNX3-204ENST00000426155 FURINP09958 794 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 CCNYL3P0C7X3 344 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 MSL3P1P0C860 447 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 CYP2A7P20853 494 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 GRIA3P42263 894 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 ITGA1P56199 1179 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 SLC7A5Q01650 507 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 CDC20Q12834 499 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 DNASE1L3Q13609 305 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 TSTA3Q13630 321 aaPredicted RBP13.11□□□□□ -0.31
SNX3-204ENST00000426155 SF1Q15637 639 aaKnown RBP13.11□□□□□ -0.31
SNX3-204ENST00000426155 TBR1Q16650 682 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 PTCHD3Q3KNS1 767 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 ZDHHC24Q6UX98 284 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 BPHLQ86WA6 291 aaPredicted RBP13.11□□□□□ -0.31
SNX3-204ENST00000426155 GPATCH11Q8N954 259 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 OR9A1PQ8NGU1 263 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 EEF1AKMT1Q8WVE0 214 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 MR1Q95460 341 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 CLIP3Q96DZ5 547 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 TCTN2Q96GX1 697 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 FCRL4Q96PJ5 515 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 OLFM1Q99784 485 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 RAB11FIP5Q9BXF6 653 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 ACTR5Q9H9F9 607 aaPredicted RBP13.11□□□□□ -0.31
SNX3-204ENST00000426155 SMYD2Q9NRG4 433 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 PCMTD2Q9NV79 361 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 SPATA7Q9P0W8 599 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 CDC23Q9UJX2 597 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 PADI1Q9ULC6 663 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 PCDHB3Q9Y5E6 796 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 COMMD10Q9Y6G5 202 aa13.11□□□□□ -0.31
SNX3-204ENST00000426155 PCSK5Q92824 1860 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 E7EQ34 232 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 MAP3K7O43318 606 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 ZNF749O43361 778 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 MT-ND3P03897 115 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 FAM87AP0C7U9 286 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 MPC1LP0DKB6 136 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 ERGP11308 486 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 SSTR1P30872 391 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 RORAP35398 523 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 CKAP4Q07065 602 aaKnown RBP13.1□□□□□ -0.31
SNX3-204ENST00000426155 HECTD2Q5U5R9 776 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 PAQR3Q6TCH7 311 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 MBOAT1Q6ZNC8 495 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 KIAA0408Q6ZU52 694 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 NEK10Q6ZWH5 1172 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
SNX3-204ENST00000426155 DSELQ8IZU8 1212 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 DNAJC22Q8N4W6 341 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 RAB42Q8N4Z0 105 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 EXD3Q8N9H8 876 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 BBOF1Q8ND07 529 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 OR2A1Q8NGT9 310 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 OR8K5Q8NH50 307 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 HMGCLL1Q8TB92 370 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms