RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ESRRAP11474 423 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GABRA4P48169 554 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CDKN1CP49918 316 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PRAMEP78395 509 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZIC1Q15915 447 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MUM1Q2TAK8 710 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 KIRREL2Q6UWL6 708 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 UNC5DQ6UXZ4 953 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NLRP9Q7RTR0 991 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GDF7Q7Z4P5 450 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 DCUN1D3Q8IWE4 304 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MCEMP1Q8IX19 187 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 UBL4BQ8N7F7 174 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 OR6P1Q8NGX9 317 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 INPP5DQ92835 1189 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RELTQ969Z4 430 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PANX3Q96QZ0 392 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CARD6Q9BX69 1037 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 C10orf88Q9H8K7 445 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZBTB20Q9HC78 741 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NTNG1Q9Y2I2 539 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PCDHA13Q9Y5I0 950 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ICE1Q9Y2F5 2266 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CREBBPQ92793 2442 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TRGV8A0A0C4DH27 118 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HYKKA2RU49 373 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ERI2A8K979 691 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 H3BMH7 237 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CCL22O00626 93 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TXNDC9O14530 226 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SOCS6O14544 535 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 VPS26AO75436 327 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RASAL1O95294 804 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ANXA5P08758 320 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 COX6B1P14854 86 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PTGER4P35408 488 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SMSP52788 366 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 EMP2P54851 167 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CSE1LP55060 971 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CDH17Q12864 832 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 WASHC2DQ5SRD0 308 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PTRHD1Q6GMV3 140 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 DENND5AQ6IQ26 1287 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CNSTQ6PJW8 725 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 XKRXQ6PP77 449 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 AFTPHQ6ULP2 937 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RPTNQ6XPR3 784 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PPP1R21Q6ZMI0 780 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NDUFAF7Q7L592 441 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 VSTM4Q8IW00 320 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TXLNBQ8N3L3 684 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 OR2L8Q8NGY9 312 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HAS2Q92819 552 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZC3H7BQ9UGR2 993 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PLAGL1Q9UM63 463 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HS3ST3B1Q9Y662 390 aa11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TNRC6AQ8NDV7 1962 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB3-203ENST00000425319 BSNQ9UPA5 3926 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 BHMG1C9JSJ3 638 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CCL21O00585 134 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PJA2O43164 708 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 BMP10O95393 424 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 EIF2S1P05198 315 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HEXBP07686 556 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZGLP1P0C6A0 271 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CMPK1P30085 196 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PKLRP30613 574 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 STIP1P31948 543 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CTNNA1P35221 906 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PTPN7P35236 360 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CCNFP41002 786 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GRIA3P42263 894 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 OR1D4P47884 311 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 VSX2P58304 361 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MSLNQ13421 630 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZNF658BQ4V348 819 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ABHD17BQ5VST6 288 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RIPOR1Q6ZS17 1223 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SHISA6Q6ZSJ9 500 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SLC22A15Q8IZD6 547 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZNF808Q8N4W9 903 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 C2orf73Q8N5S3 287 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 OR11G2Q8NGC1 345 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 OR4L1Q8NH43 312 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 STT3BQ8TCJ2 826 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 METTL21AQ8WXB1 218 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 IGSF5Q9NSI5 407 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RIC8BQ9NVN3 520 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ABI3Q9P2A4 366 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PTGFRNQ9P2B2 879 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SEC14L3Q9UDX4 400 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 C3orf18Q9UK00 162 aa11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SPTAN1Q13813 2472 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB3-203ENST00000425319 VSTM2BA6NLU5 285 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZNF839A8K0R7 811 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 AP3B1O00203 1094 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RASGRF2O14827 1237 aa11.73□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PHF2O75151 1096 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms