RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 MAPK1IP1LQ8NDC0 245 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 MDS2Q8NDY4 140 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 OR52E1Q8NGJ3 308 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 METTL21AQ8WXB1 218 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 SLCO2A1Q92959 643 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 SCMH1Q96GD3 660 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 RMDN2Q96LZ7 410 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 MCEEQ96PE7 176 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 CCM2Q9BSQ5 444 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 TUBB6Q9BUF5 446 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 VPS16Q9H269 839 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 ZWILCHQ9H900 591 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 BPIFA1Q9NP55 256 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6□□□□□ -1.45
SDCBP-203ENST00000424270 TRPC4Q9UBN4 977 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 ADGRE2Q9UHX3 823 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 EIF3LQ9Y262 564 aaKnown RBP6□□□□□ -1.45
SDCBP-203ENST00000424270 DOCK10Q96BY6 2186 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 A0A0G2JNJ9 132 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 BICDL2A1A5D9 508 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 MGAT4DA6NG13 374 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 VSTM2BA6NLU5 285 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 ANKRD66B4E2M5 251 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 H3BRJ5 948 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 DDX3XO00571 662 aaKnown RBP eCLIP5.99□□□□□ -1.454e-16■□□□□ 11.2
SDCBP-203ENST00000424270 FFAR3O14843 346 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 CASKO14936 926 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 GPR42O15529 346 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 PRPSAP2O60256 369 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 SEC24DO94855 1032 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 STATHP02808 62 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 EIF2S1P05198 315 aaKnown RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 FAM157CP0CG43 387 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 ERVK-10P10266 1014 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 EPXP11678 715 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 TPH1P17752 444 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 TFEBP19484 476 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 BMP5P22003 454 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 AMPD1P23109 780 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 CES1P23141 567 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 CMA1P23946 247 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 MCM3P25205 808 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 CHRNA4P43681 627 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 ZNF165P49910 485 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 NDUFA8P51970 172 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 ZNF143P52747 638 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 TAS2R50P59544 299 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 NOMO3P69849 1222 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 PNOCQ13519 176 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 MESDQ14696 234 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 TAZQ16635 292 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 QPCTQ16769 361 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 CA9Q16790 459 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 GXYLT1Q4G148 440 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 TCTE1Q5JU00 501 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 RNFT1Q5M7Z0 435 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 LDLRAP1Q5SW96 308 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 YOD1Q5VVQ6 348 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 ISM2Q6H9L7 571 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 ACAD10Q6JQN1 1059 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 C12orf54Q6X4T0 127 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 NT5DC3Q86UY8 548 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 KIF18BQ86Y91 864 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 SLC13A5Q86YT5 568 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 TRIM59Q8IWR1 403 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 CHERPQ8IWX8 916 aaKnown RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 SLC5A8Q8N695 610 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 POGLUT1Q8NBL1 392 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 PHC3Q8NDX5 983 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 LINC01560Q8TB33 94 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 VPS35Q96QK1 796 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 LYSMD1Q96S90 227 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 NRTNQ99748 197 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 OLFM1Q99784 485 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 SELENOSQ9BQE4 189 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 TTYH2Q9BSA4 534 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 BEX2Q9BXY8 128 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 DEFB127Q9H1M4 99 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 UBTD1Q9HAC8 227 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 PNPLA3Q9NST1 481 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 RBM22Q9NW64 420 aaKnown RBP eCLIP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 ADAM22Q9P0K1 906 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 B4GALT7Q9UBV7 327 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 Q9UFV3 132 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 MTRF1LQ9UGC7 380 aaKnown RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 CTNND2Q9UQB3 1225 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 KLHL20Q9Y2M5 609 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 TDRKHQ9Y2W6 561 aaKnown RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 ZNF711Q9Y462 761 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 HRH3Q9Y5N1 445 aa5.99□□□□□ -1.45
SDCBP-203ENST00000424270 DNMT3AQ9Y6K1 912 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-203ENST00000424270 CCDC88CQ9P219 2028 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 IGHV3-20A0A0C4DH32 117 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 A0A0G2JK05 382 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 H3BMH7 237 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 KLRC4-KLRK1H3BQV0 150 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 SYT5O00445 386 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 PES1O00541 588 aaKnown RBP5.98□□□□□ -1.45
SDCBP-203ENST00000424270 DVL2O14641 736 aa5.98□□□□□ -1.45
SDCBP-203ENST00000424270 PRPF4O43172 522 aaKnown RBP eCLIP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms