RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ZNF148Q9UQR1 794 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 TCAF1Q9Y4C2 921 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 CENPEQ02224 2701 aa15.51■□□□□ 0.07
COL18A1-205ENST00000423214 CPAMD8Q8IZJ3 1885 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 ANKUB1A6NFN9 424 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 MASP2O00187 686 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 RASGRF2O14827 1237 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 DSCR3O14972 297 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 LIASO43766 372 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 APRTP07741 180 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 MMP11P24347 488 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 GLRBP48167 497 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 ACVR1Q04771 509 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 GRM7Q14831 915 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 SF1Q15637 639 aaKnown RBP15.5■□□□□ 0.07
COL18A1-205ENST00000423214 TCTE1Q5JU00 501 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 PTRHD1Q6GMV3 140 aaKnown RBP15.5■□□□□ 0.07
COL18A1-205ENST00000423214 ZNF534Q76KX8 674 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 MCATQ8IVS2 390 aaKnown RBP15.5■□□□□ 0.07
COL18A1-205ENST00000423214 KRT222Q8N1A0 295 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 CCDC89Q8N998 374 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 OR2L8Q8NGY9 312 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 PEX13Q92968 403 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 NACC2Q96BF6 587 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 HES6Q96HZ4 224 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 VPS50Q96JG6 964 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 C5orf34Q96MH7 638 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 ZNF778Q96MU6 729 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 PANX3Q96QZ0 392 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 SELENOSQ9BQE4 189 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 CARD6Q9BX69 1037 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 WDR54Q9H977 334 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 MRM3Q9HC36 420 aaKnown RBP15.5■□□□□ 0.07
COL18A1-205ENST00000423214 SLC6A20Q9NP91 592 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 CUTCQ9NTM9 273 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 GNPTGQ9UJJ9 305 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 MRFAP1Q9Y605 127 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 COPG1Q9Y678 874 aaKnown RBP15.5■□□□□ 0.07
COL18A1-205ENST00000423214 FAM169AQ9Y6X4 670 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 MYO9AB2RTY4 2548 aa15.5■□□□□ 0.07
COL18A1-205ENST00000423214 IQCF5A8MTL0 148 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 PRMT5O14744 637 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-205ENST00000423214 ALOX12BO75342 701 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 GPC4O75487 556 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 ALBP02768 609 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 GRIA1P42261 906 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 TTPAP49638 278 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 SEMA3AQ14563 771 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 OASLQ15646 514 aaKnown RBP15.49■□□□□ 0.07
COL18A1-205ENST00000423214 RBBP7Q16576 425 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 TUBB8Q3ZCM7 444 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 YOD1Q5VVQ6 348 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-205ENST00000423214 PRAMEF13Q5VWM6 474 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 FIGLAQ6QHK4 219 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 OVCH1Q7RTY7 1134 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 MAMDC2Q7Z304 686 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-205ENST00000423214 RNF10Q8N5U6 811 aaKnown RBP15.49■□□□□ 0.07
COL18A1-205ENST00000423214 OTUD6BQ8N6M0 293 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 WDR77Q9BQA1 342 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-205ENST00000423214 MENTQ9BUN1 341 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 AGPAT4Q9NRZ5 378 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 SLC22A11Q9NSA0 550 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 NXT1Q9UKK6 140 aaKnown RBP15.49■□□□□ 0.07
COL18A1-205ENST00000423214 SLC5A6Q9Y289 635 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 PCDHGA10Q9Y5H3 936 aa15.49■□□□□ 0.07
COL18A1-205ENST00000423214 FKBP9O95302 570 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 CBX6O95503 412 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 ITGAXP20702 1163 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 MCM3P25205 808 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 AOAHP28039 575 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 BDKRB1P46663 353 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 GCGRP47871 477 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 SOX8P57073 446 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 SNX1Q13596 522 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 Q6ZS92 163 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 LDB1Q86U70 411 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-205ENST00000423214 METTL27Q8N6F8 245 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-205ENST00000423214 LMNTD1Q8N9Z9 388 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 PPP4R1Q8TF05 950 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 UBE2Q2Q8WVN8 375 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 INPP5DQ92835 1189 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 SPSB2Q99619 263 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 SOX17Q9H6I2 414 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-205ENST00000423214 EPS8L2Q9H6S3 715 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 PAK5Q9P286 719 aa15.48■□□□□ 0.07
COL18A1-205ENST00000423214 ERRFI1Q9UJM3 462 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-205ENST00000423214 POLEQ07864 2286 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 SOCS6O14544 535 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 KPNA5O15131 536 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 SLCO2B1O94956 709 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 LDLRP01130 860 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 GRIA3P42263 894 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 SESN2P58004 480 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-205ENST00000423214 VSX2P58304 361 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-205ENST00000423214 GRB7Q14451 532 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 NKG7Q16617 165 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 CROCCQ5TZA2 2017 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 AGAP7PQ5VUJ5 663 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 FCRL6Q6DN72 434 aa15.47■□□□□ 0.07
COL18A1-205ENST00000423214 SHISA6Q6ZSJ9 500 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms