RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TRAPPC9Q96Q05 1148 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 DDA1Q9BW61 102 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 ACAT2Q9BWD1 397 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 FANCEQ9HB96 536 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 APMAPQ9HDC9 416 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 INTS7Q9NVH2 962 aaKnown RBP15.21■□□□□ 0.03
BRAT1-202ENST00000421712 CTNNAL1Q9UBT7 734 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 RARRES3Q9UL19 164 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 PDE10AQ9Y233 779 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 PCDHGA7Q9Y5G6 932 aa15.21■□□□□ 0.03
BRAT1-202ENST00000421712 AKAP13Q12802 2813 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 EXOC1LA0A1B0GW35 172 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 NPEPPSL1A6NEC2 478 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 CDC7O00311 574 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 RRP8O43159 456 aaKnown RBP15.2■□□□□ 0.02
BRAT1-202ENST00000421712 RIPK2O43353 540 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 TLX3O43711 291 aaPredicted RBP15.2■□□□□ 0.02
BRAT1-202ENST00000421712 GUCA1CO95843 209 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 CCDC166P0CW27 439 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 PSMB5P28074 263 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 TNFRSF8P28908 595 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 CRABP2P29373 138 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 CSHL1Q14406 222 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 IL11RAQ14626 422 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 FRA10AC1Q70Z53 315 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 CMC1Q7Z7K0 106 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 CLEC14AQ86T13 490 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 PPP1R3BQ86XI6 285 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 PROSER1Q86XN7 944 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 D2HGDHQ8N465 521 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 SPATA6LQ8N4H0 392 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 C19orf47Q8N9M1 422 aaKnown RBP15.2■□□□□ 0.02
BRAT1-202ENST00000421712 HMGCLL1Q8TB92 370 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 ZNF480Q8WV37 535 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 ANKRD49Q8WVL7 239 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 SLC44A1Q8WWI5 657 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 DLG3Q92796 817 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 PMEPA1Q969W9 287 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 RNF31Q96EP0 1072 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 PAFAH2Q99487 392 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 MIPEPQ99797 713 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 ZPBPQ9BS86 351 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 FUT8Q9BYC5 575 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 PITPNM3Q9BZ71 974 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 UNKQ9C0B0 810 aaKnown RBP15.2■□□□□ 0.02
BRAT1-202ENST00000421712 FGF21Q9NSA1 209 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 SIDT1Q9NXL6 827 aaKnown RBP15.2■□□□□ 0.02
BRAT1-202ENST00000421712 ARL15Q9NXU5 204 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 UTP6Q9NYH9 597 aaKnown RBP15.2■□□□□ 0.02
BRAT1-202ENST00000421712 FOXJ2Q9P0K8 574 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 TLK1Q9UKI8 766 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 ZMIZ1Q9ULJ6 1067 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 KLHL20Q9Y2M5 609 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 RAXQ9Y2V3 346 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 PCM1Q15154 2024 aa15.2■□□□□ 0.02
BRAT1-202ENST00000421712 CAPNS1P04632 268 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 ABHD2P08910 425 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 CMPK1P30085 196 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 SERPINB9P50453 376 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 SLC29A2Q14542 456 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 GPR19Q15760 415 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 PHKG1Q16816 387 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 ST3GAL2Q16842 350 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 MBOAT1Q6ZNC8 495 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 LRRC69Q6ZNQ3 347 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 TBC1D1Q86TI0 1168 aaPredicted RBP15.19■□□□□ 0.02
BRAT1-202ENST00000421712 ZFAND4Q86XD8 727 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 ZNF248Q8NDW4 579 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 FLVCR1-AS1Q8TAF5 88 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.19■□□□□ 0.02
BRAT1-202ENST00000421712 MED8Q96G25 268 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 TCTN2Q96GX1 697 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 TEFMQ96QE5 360 aaKnown RBP15.19■□□□□ 0.02
BRAT1-202ENST00000421712 CCDC77Q9BR77 488 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 B3GNT4Q9C0J1 378 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 DERL2Q9GZP9 239 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 ATG10Q9H0Y0 220 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 IRAK4Q9NWZ3 460 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 STOX2Q9P2F5 926 aaPredicted RBP15.19■□□□□ 0.02
BRAT1-202ENST00000421712 BTRCQ9Y297 605 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 PCDHGA3Q9Y5H0 932 aa15.19■□□□□ 0.02
BRAT1-202ENST00000421712 TPRP12270 2363 aaKnown RBP15.18■□□□□ 0.02
BRAT1-202ENST00000421712 TMEM150CB9EJG8 249 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 TAF4O00268 1085 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 KRT38O76015 456 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 ENO2P09104 434 aaPredicted RBP15.18■□□□□ 0.02
BRAT1-202ENST00000421712 ERGP11308 486 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 MAGP20916 626 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 CD82P27701 267 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 IMPA1P29218 277 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 TYK2P29597 1187 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 AP1S2P56377 157 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 VSNL1P62760 191 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 TSNQ15631 228 aaKnown RBP15.18■□□□□ 0.02
BRAT1-202ENST00000421712 ERCC6LQ2NKX8 1250 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 TAF1BQ53T94 588 aaPredicted RBP15.18■□□□□ 0.02
BRAT1-202ENST00000421712 LGSNQ5TDP6 509 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 KIAA1614Q5VZ46 1190 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 FIGLAQ6QHK4 219 aa15.18■□□□□ 0.02
BRAT1-202ENST00000421712 BPHLQ86WA6 291 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms