RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 FEVQ99581 238 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 CPNE1Q99829 537 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 TMEM47Q9BQJ4 181 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 ALG12Q9BV10 488 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 NUP58Q9BVL2 599 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 NMNAT2Q9BZQ4 307 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 TDRD3Q9H7E2 651 aaKnown RBP5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 MED20Q9H944 212 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 UPF2Q9HAU5 1272 aaKnown RBP5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 CHMP1AQ9HD42 196 aaPredicted RBP5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 NUDT15Q9NV35 164 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 KLHL28Q9NXS3 571 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 TFCP2L1Q9NZI6 479 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 EHD3Q9NZN3 535 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 SPATA7Q9P0W8 599 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 SERGEFQ9UGK8 458 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 CRLS1Q9UJA2 301 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 ZFR2Q9UPR6 939 aaKnown RBP5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 CHMP2BQ9UQN3 213 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 MRPS33Q9Y291 106 aaKnown RBP5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 B3GNT3Q9Y2A9 372 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 LSM4Q9Y4Z0 139 aaKnown RBP5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 CEPT1Q9Y6K0 416 aa5.34□□□□□ -1.55
PTP4A1P1-201ENST00000420539 SPATA31A1Q5TZJ5 1347 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SPATA31A5Q5VU36 1347 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SPATA31A7Q8IWB4 1347 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 A0A0U1RRA0 63 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 FAM149AA5PLN7 773 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ARHGEF35A5YM69 484 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 DUXAA6NLW8 204 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 H3BMM5 538 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 MAP2K7O14733 419 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 NDUFS4O43181 175 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 AP5Z1O43299 807 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ZNF208O43345 1280 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SPRY2O43597 315 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ECE2O60344 883 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ATP6V1G1O75348 118 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ERN1O75460 977 aaKnown RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 OR6A2O95222 327 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ERBB2P04626 1255 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 F3P13726 295 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 MATN1P21941 496 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 PAICSP22234 425 aaKnown RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 HLA-FP30511 346 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SHMT1P34896 483 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 HAAOP46952 286 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 NPBWR1P48145 328 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 LEPRP48357 1165 aaKnown RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 RGS7P49802 495 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 CACNA2D1P54289 1103 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 CLDN8P56748 225 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 RPL23AP62750 156 aaKnown RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 XIAPP98170 497 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 PPP2R2BQ00005 443 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 FOXL1Q12952 345 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 MAB21L1Q13394 359 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ME3Q16798 604 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 FAM174BQ3ZCQ3 159 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 PAQR9Q6ZVX9 377 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 TMPRSS9Q7Z410 1059 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ASPGQ86U10 573 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 CDR2LQ86X02 465 aaPredicted RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 TMEM126BQ8IUX1 230 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 UBE2J2Q8N2K1 259 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 CERS5Q8N5B7 392 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 COMMD1Q8N668 190 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 KIAA0895Q8NCT3 520 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 RDM1Q8NG50 284 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ZFP28Q8NHY6 868 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 WIPF2Q8TF74 440 aaPredicted RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ATL1Q8WXF7 558 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 PIGKQ92643 395 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 IGSF8Q969P0 613 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 RHBDF1Q96CC6 855 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 CTHRC1Q96CG8 243 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 FAM71F1Q96KD3 344 aaPredicted RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SENP8Q96LD8 212 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 OR1F2PQ96R84 312 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 TAAR6Q96RI8 345 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SMC6Q96SB8 1091 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 DCLRE1CQ96SD1 692 aaKnown RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 CITED1Q99966 193 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ATG101Q9BSB4 218 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SFXN1Q9H9B4 322 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 TREM1Q9NP99 234 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 FAM207AQ9NSI2 230 aaPredicted RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ARL15Q9NXU5 204 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 DBF4Q9UBU7 674 aaPredicted RBP5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 RNF150Q9ULK6 438 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SLC9A8Q9Y2E8 581 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 CLIC4Q9Y696 253 aa5.33□□□□□ -1.56
PTP4A1P1-201ENST00000420539 PFASO15067 1338 aa5.32□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ABCC4O15439 1325 aa5.32□□□□□ -1.56
PTP4A1P1-201ENST00000420539 SF3B1O75533 1304 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTP4A1P1-201ENST00000420539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.32□□□□□ -1.56
PTP4A1P1-201ENST00000420539 ERICH2A1L162 156 aa5.32□□□□□ -1.56
PTP4A1P1-201ENST00000420539 PIPSLA2A3N6 862 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms