RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 RAB11FIP5Q9BXF6 653 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 INTS7Q9NVH2 962 aaKnown RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 SYBUQ9NX95 663 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 ANKMY1Q9P2S6 941 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 CIDEBQ9UHD4 219 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 KLHL20Q9Y2M5 609 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 PTRH2Q9Y3E5 179 aaKnown RBP9.07□□□□□ -0.96
NUP50-205ENST00000419387 MRFAP1Q9Y605 127 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 MED13Q9UHV7 2174 aa9.07□□□□□ -0.96
NUP50-205ENST00000419387 TCRBV7S3A2A0A539 114 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 CLEC18AA5D8T8 446 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 TARM1B6A8C7 271 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 PEX12O00623 359 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 PFDN6O15212 129 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 ZSCAN12O43309 604 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 PRICKLE3O43900 615 aaPredicted RBP9.06□□□□□ -0.96
NUP50-205ENST00000419387 VPS4BO75351 444 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 FKBP9O95302 570 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 C1orf105O95561 183 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 IGHEP01854 428 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 ARNTP27540 789 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 FMO4P31512 558 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 CXCR5P32302 372 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 GCGRP47871 477 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 EIF3BP55884 814 aaKnown RBP9.06□□□□□ -0.96
NUP50-205ENST00000419387 SARNPP82979 210 aaKnown RBP9.06□□□□□ -0.96
NUP50-205ENST00000419387 SRSF1Q07955 248 aaKnown RBP eCLIP9.06□□□□□ -0.96
NUP50-205ENST00000419387 NKAIN1Q4KMZ8 207 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 ZC3H12BQ5HYM0 836 aaKnown RBP9.06□□□□□ -0.96
NUP50-205ENST00000419387 CTSL3PQ5NE16 218 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 FCRL6Q6DN72 434 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 MRNIPQ6NTE8 343 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 CES3Q6UWW8 571 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 CLEC18BQ6UXF7 455 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 MRGPREQ86SM8 312 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 TAX1BP1Q86VP1 789 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 SLC35F6Q8N357 371 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 RAB42Q8N4Z0 105 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 FAM26EQ8N5C1 309 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 OTUD6BQ8N6M0 293 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 PRELID2Q8N945 189 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 CLEC18CQ8NCF0 446 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 OR2Y1Q8NGV0 311 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 MAGEC3Q8TD91 643 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 SKA2Q8WVK7 121 aaPredicted RBP9.06□□□□□ -0.96
NUP50-205ENST00000419387 ZUFSPQ96AP4 578 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 FOPNLQ96NB1 174 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 BIRC8Q96P09 236 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 TCF12Q99081 682 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 GPR83Q9NYM4 423 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 C5AR2Q9P296 337 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 TTC7AQ9ULT0 858 aaPredicted RBP9.06□□□□□ -0.96
NUP50-205ENST00000419387 VPS4AQ9UN37 437 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 SOX13Q9UN79 622 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 MAP4K5Q9Y4K4 846 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 NFS1Q9Y697 457 aa9.06□□□□□ -0.96
NUP50-205ENST00000419387 TNRC6AQ8NDV7 1962 aaKnown RBP9.06□□□□□ -0.96
NUP50-205ENST00000419387 NBASA2RRP1 2371 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 GOLGA8KD6RF30 607 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 H3BMM5 538 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 GOLGA8TH3BQL2 631 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 CNOT3O75175 753 aaKnown RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 SORBS2O94875 1100 aaKnown RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 ONECUT2O95948 504 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 UMODP07911 640 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 PIM1P11309 404 aaPredicted RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 CCNFP41002 786 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 GRIA3P42263 894 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 BDKRB1P46663 353 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 TERF1P54274 439 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 ADARP55265 1226 aaKnown RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 KCNJ11Q14654 390 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 SLC9A5Q14940 896 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 TRIP13Q15645 432 aaPredicted RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 KCTD19Q17RG1 926 aaPredicted RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 CCSMST1Q4G0I0 132 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 TCTE1Q5JU00 501 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 DCAF10Q5QP82 559 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 RNF187Q5TA31 235 aaPredicted RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 YOD1Q5VVQ6 348 aaPredicted RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 ARMC3Q5W041 872 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 KIAA0930Q6ICG6 404 aaPredicted RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 JMJD6Q6NYC1 403 aaPredicted RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 TTLL10Q6ZVT0 673 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 OVCH1Q7RTY7 1134 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 RASGEF1CQ8N431 466 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 RBMXL3Q8N7X1 1067 aaKnown RBP9.05□□□□□ -0.96
NUP50-205ENST00000419387 CLEC1AQ8NC01 280 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 GALNT11Q8NCW6 608 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 HMGCLL1Q8TB92 370 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 LPGAT1Q92604 370 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 COL26A1Q96A83 441 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 SLAMF7Q9NQ25 335 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 ENAMQ9NRM1 1142 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 SLC22A11Q9NSA0 550 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 JRKLQ9Y4A0 524 aa9.05□□□□□ -0.96
NUP50-205ENST00000419387 A0A1B0GX78 115 aa9.04□□□□□ -0.96
NUP50-205ENST00000419387 MAGEB16A2A368 324 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms