RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 LGR4Q9BXB1 951 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ZDHHC5Q9C0B5 715 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 FARSBQ9NSD9 589 aaKnown RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 LIMD1Q9UGP4 676 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 BRWD1Q9NSI6 2320 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 E7ENX8 843 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ANKRD28O15084 1053 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 MBTPS2O43462 519 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 SEC22BO75396 215 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 HOXC4P09017 264 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ACADMP11310 421 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 PRPS2P11908 318 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 COL9A1P20849 921 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 KELP23276 732 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 HSD17B2P37059 387 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 TRAP1Q12931 704 aaKnown RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 CCNIQ14094 377 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 FLOT2Q14254 428 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ARHGAP19Q14CB8 494 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 XKR6Q5GH73 641 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 DOK6Q6PKX4 331 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 DCUN1D3Q8IWE4 304 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 SETD7Q8WTS6 366 aaKnown RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ZNF480Q8WV37 535 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 FOXJ1Q92949 421 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 MED8Q96G25 268 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 TEX37Q96LM6 180 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 TIMM29Q9BSF4 260 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 SGPP1Q9BX95 441 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ACPTQ9BZG2 426 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 EHD1Q9H4M9 534 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 S100A14Q9HCY8 104 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ABCD2Q9UBJ2 740 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 POLR3HQ9Y535 204 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 PCDHGA11Q9Y5H2 935 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3DA0A087WVF3 549 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3IA0A087WXS9 549 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3EA0A087X179 549 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3KA0A087X1G2 549 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 C15orf38-AP3S2A0A0A6YYH1 394 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3FA6NER0 549 aaPredicted RBP16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3LB9A6J9 549 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3HP0C7X1 549 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 PTDSS1P48651 473 aaKnown RBP16.29■□□□□ 0.2
SSBP3-205ENST00000417664 HMGCS1Q01581 520 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TRIM25Q14258 630 aaKnown RBP16.29■□□□□ 0.2
SSBP3-205ENST00000417664 KIAA0040Q15053 153 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 CCSMST1Q4G0I0 132 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 SGO1Q5FBB7 561 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3GQ6DHY5 549 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3CQ6IPX1 549 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 ZFP1Q6P2D0 407 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 ARPINQ7Z6K5 226 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 SYTL1Q8IYJ3 562 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 TBC1D3Q8IZP1 549 aaPredicted RBP16.29■□□□□ 0.2
SSBP3-205ENST00000417664 DPP10Q8N608 796 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 DENND6BQ8NEG7 585 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 SLC26A7Q8TE54 656 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 LRRC58Q96CX6 371 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 REPS1Q96D71 796 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 WDR34Q96EX3 536 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 PHF7Q9BWX1 381 aaPredicted RBP16.29■□□□□ 0.2
SSBP3-205ENST00000417664 BRF2Q9HAW0 419 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 CD300AQ9UGN4 299 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 ASF1AQ9Y294 204 aa16.29■□□□□ 0.2
SSBP3-205ENST00000417664 ZNF839A8K0R7 811 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 PI15O43692 258 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 PRAMEF4O60810 478 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 SORBS2O94875 1100 aaKnown RBP16.28■□□□□ 0.2
SSBP3-205ENST00000417664 ANPEPP15144 967 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 XRCC1P18887 633 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-205ENST00000417664 VARSP26640 1264 aaKnown RBP16.28■□□□□ 0.2
SSBP3-205ENST00000417664 DOC2AQ14183 400 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 TLR1Q15399 786 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 WLSQ5T9L3 541 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 PRAMEF9Q5VWM5 478 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 FAM83HQ6ZRV2 1179 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-205ENST00000417664 PHC3Q8NDX5 983 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 WDR20Q8TBZ3 569 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 TFGQ92734 400 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-205ENST00000417664 MRGPRX1Q96LB2 322 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 OR4K3Q96R72 315 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 UHRF1Q96T88 793 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-205ENST00000417664 ACTL8Q9H568 366 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 SLC17A4Q9Y2C5 497 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 OR1A2Q9Y585 309 aa16.28■□□□□ 0.2
SSBP3-205ENST00000417664 E7EQ34 232 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 ACOT8O14734 319 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 IL6P05231 212 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 IL12AP29459 219 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 VHLP40337 213 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 TBPL1P62380 186 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 TAP2Q03519 686 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 NFYCQ13952 458 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 PLA2G4EQ3MJ16 856 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 EFCAB3Q8N7B9 438 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 OR5K2Q8NHB8 316 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 EFCAB11Q9BUY7 163 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 DPY30Q9C005 99 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms