RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 SPATA13Q96N96 652 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 TTC1Q99614 292 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 CHP1Q99653 195 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 GOLPH3Q9H4A6 298 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 ARNT2Q9HBZ2 717 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 ZNF160Q9HCG1 818 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 CHST11Q9NPF2 352 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 LUC7LQ9NQ29 371 aaKnown RBP9.61□□□□□ -0.87
MDC1-202ENST00000416571 ABHD10Q9NUJ1 306 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 NLE1Q9NVX2 485 aaPredicted RBP9.61□□□□□ -0.87
MDC1-202ENST00000416571 IMPACTQ9P2X3 320 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 CTSFQ9UBX1 484 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 INTUQ9ULD6 942 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 KLHL20Q9Y2M5 609 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 CELSR1Q9NYQ6 3014 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 APCP25054 2843 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 CNTRLQ7Z7A1 2325 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 ADGRG4Q8IZF6 3080 aa9.61□□□□□ -0.87
MDC1-202ENST00000416571 TRAV17A0A0B4J275 112 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 SLC5A10A0PJK1 596 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 CBFA2T2O43439 604 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 USP1O94782 785 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 KLHL18O94889 574 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 ONECUT2O95948 504 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 SNRPB2P08579 225 aaKnown RBP9.6□□□□□ -0.87
MDC1-202ENST00000416571 TPBGLP0DKB5 382 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 COX6B1P14854 86 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 CXCR2P25025 360 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 MCM3P25205 808 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 MSNP26038 577 aaKnown RBP9.6□□□□□ -0.87
MDC1-202ENST00000416571 PKLRP30613 574 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 GRIA3P42263 894 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 OR1D4P47884 311 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 MARCKSL1P49006 195 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 RBPJQ06330 500 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 MSLNQ13421 630 aaPredicted RBP9.6□□□□□ -0.87
MDC1-202ENST00000416571 POU6F1Q14863 301 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 TCEAL1Q15170 157 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 SF1Q15637 639 aaKnown RBP9.6□□□□□ -0.87
MDC1-202ENST00000416571 INAQ16352 499 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 VWA2Q5GFL6 755 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 DENND5AQ6IQ26 1287 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 TMEM207Q6UWW9 146 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 PACS1Q6VY07 963 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 NAPRTQ6XQN6 538 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 ARHGEF18Q6ZSZ5 1173 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 COX15Q7KZN9 410 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 MRGPRGQ86SM5 289 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 KBTBD2Q8IY47 623 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 PIANPQ8IYJ0 282 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 PRSS58Q8IYP2 241 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 C2orf73Q8N5S3 287 aaPredicted RBP9.6□□□□□ -0.87
MDC1-202ENST00000416571 STYXQ8WUJ0 223 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 MIEF2Q96C03 454 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 TSSK1BQ9BXA7 367 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.6□□□□□ -0.87
MDC1-202ENST00000416571 ZNF304Q9HCX3 659 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 PTGFRNQ9P2B2 879 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 ZNF282Q9UDV7 671 aaPredicted RBP9.6□□□□□ -0.87
MDC1-202ENST00000416571 ITGB1BP2Q9UKP3 347 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 SLC39A10Q9ULF5 831 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 PRSS21Q9Y6M0 314 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 MAU2Q9Y6X3 613 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 FAM169AQ9Y6X4 670 aa9.6□□□□□ -0.87
MDC1-202ENST00000416571 NSG1A0A0A6YYJ2 146 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 BHMG1C9JSJ3 638 aaPredicted RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 CCL21O00585 134 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 PCDH17O14917 1159 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 ZNF189O75820 626 aaPredicted RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 UNC5CO95185 931 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 S1PR4O95977 384 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 CRYABP02511 175 aaKnown RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 PTMAP06454 111 aaKnown RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 TPH1P17752 444 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 CD9P21926 228 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 FDXRP22570 491 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 HTR1EP28566 365 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 CETN2P41208 172 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 GCGRP47871 477 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 TDGF1P3P51864 188 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 HADHBP55084 474 aaKnown RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 CASP6P55212 293 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 VSX2P58304 361 aaPredicted RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 COPS2P61201 443 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 KLC1Q07866 573 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 HSPA14Q0VDF9 509 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 Q0VFX4 171 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 DNAJC21Q5F1R6 531 aaKnown RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 TTC23LQ6PF05 361 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 CNSTQ6PJW8 725 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 FIGLAQ6QHK4 219 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 RPTNQ6XPR3 784 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 BNC2Q6ZN30 1099 aaPredicted RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 MICALCLQ6ZW33 695 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 DCUN1D3Q8IWE4 304 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 ZNF808Q8N4W9 903 aaPredicted RBP9.59□□□□□ -0.87
MDC1-202ENST00000416571 RAB42Q8N4Z0 105 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 LINC01555Q8NAE3 123 aa9.59□□□□□ -0.87
MDC1-202ENST00000416571 CFAP61Q8NHU2 1237 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms