RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 ARL10Q8N8L6 244 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 C1orf131Q8NDD1 294 aaKnown RBP4.53□□□□□ -1.68
PTPRK-210ENST00000415055 CEP70Q8NHQ1 597 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 KIAA1143Q96AT1 154 aaPredicted RBP4.53□□□□□ -1.68
PTPRK-210ENST00000415055 TMEM159Q96B96 161 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 MIEF2Q96C03 454 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 MYEOVQ96EZ4 313 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 FEM1CQ96JP0 617 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 LMLNQ96KR4 655 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 BMFQ96LC9 184 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 CCDC114Q96M63 670 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 PRICKLE1Q96MT3 831 aaPredicted RBP4.53□□□□□ -1.68
PTPRK-210ENST00000415055 HIST1H2AAQ96QV6 131 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 HAPLN3Q96S86 360 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 AGAP2Q99490 1192 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 LRRC61Q9BV99 259 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 SLC17A9Q9BYT1 436 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 TTYH3Q9C0H2 523 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 PAIP1Q9H074 479 aaKnown RBP4.53□□□□□ -1.68
PTPRK-210ENST00000415055 INTS2Q9H0H0 1204 aaKnown RBP4.53□□□□□ -1.68
PTPRK-210ENST00000415055 CCDC68Q9H2F9 335 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 GPN2Q9H9Y4 310 aaPredicted RBP4.53□□□□□ -1.68
PTPRK-210ENST00000415055 ABCC13Q9NSE7 274 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 DKK3Q9UBP4 350 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 STOML2Q9UJZ1 356 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 BAG5Q9UL15 447 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 DMRT1Q9Y5R6 373 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 RNF215Q9Y6U7 377 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 PIKFYVEQ9Y2I7 2098 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 SEC16AO15027 2179 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 DOCK4Q8N1I0 1966 aa4.53□□□□□ -1.68
PTPRK-210ENST00000415055 DCHS2Q6V1P9 2916 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 FBN3Q75N90 2809 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 A0A1W2PQM1 296 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 GXYLT2A0PJZ3 443 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 IGLON5A6NGN9 336 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 GOLGA6L6A8MZA4 724 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 J3KTA2 159 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 TULP2O00295 520 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 MCF2LO15068 1137 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ALOX15BO15296 676 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 RAD51BO15315 384 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 EIF3DO15371 548 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 TGFB1I1O43294 461 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 RAMP2O60895 175 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ASS1P00966 412 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 RPN1P04843 607 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ALPIP09923 528 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 CCL4P13236 92 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 TCN2P20062 427 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 RBL1P28749 1068 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 CHRNA3P32297 505 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 UGT1A3P35503 534 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 RGS7P49802 495 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 DNA2P51530 1060 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 PGDP52209 483 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 DGKQP52824 942 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 PPARDQ03181 441 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 INCA1Q0VD86 236 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 TBL3Q12788 808 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 CDC20Q12834 499 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 EIF2B5Q13144 721 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 BOP1Q14137 746 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 KCNAB1Q14722 419 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 MS4A13Q5J8X5 152 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ZNF569Q5MCW4 686 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 TPRG1LQ5T0D9 272 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ATP1A1-AS1Q5TC04 95 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 C1QL3Q5VWW1 255 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ERN2Q76MJ5 926 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 VPS36Q86VN1 386 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 CCDC112Q8NEF3 446 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 SUN3Q8TAQ9 357 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 UBA3Q8TBC4 463 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ZCCHC10Q8TBK6 192 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 TAF4BQ92750 862 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ART4Q93070 314 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 PPP1R16AQ96I34 528 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 RSRC1Q96IZ7 334 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 NUDT16L1Q9BRJ7 211 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 TLR10Q9BXR5 811 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 GPR87Q9BY21 358 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 CLPBQ9H078 707 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 PDCL3Q9H2J4 239 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 RDH14Q9HBH5 336 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 MRPS18AQ9NVS2 196 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 PPP1R14DQ9NXH3 145 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 DONSONQ9NYP3 566 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 AASSQ9UDR5 926 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 KCND3Q9UK17 655 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 VPS28Q9UK41 221 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 NDRG4Q9ULP0 352 aaKnown RBP4.52□□□□□ -1.69
PTPRK-210ENST00000415055 CDYLQ9Y232 598 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 SPTBP11277 2137 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 ACANP16112 2415 aa4.52□□□□□ -1.69
PTPRK-210ENST00000415055 CROCCQ5TZA2 2017 aa4.51□□□□□ -1.69
PTPRK-210ENST00000415055 ABCA4P78363 2273 aa4.51□□□□□ -1.69
PTPRK-210ENST00000415055 FRMD3A2A2Y4 597 aa4.51□□□□□ -1.69
PTPRK-210ENST00000415055 PGPEP1LA6NFU8 196 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms