RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HEBP2Q9Y5Z4 205 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 ELOVL7A1L3X0 281 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 RNF13O43567 381 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 MMP20O60882 483 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 PSMA1P25786 263 aaKnown RBP18.12■□□□□ 0.49
SHANK3-202ENST00000414786 ATP6V0D1P61421 351 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 BICRALQ6AI39 1079 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 TMEM192Q8IY95 271 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 AADATQ8N5Z0 425 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 TEX19Q8NA77 164 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 INO80EQ8NBZ0 244 aaPredicted RBP18.12■□□□□ 0.49
SHANK3-202ENST00000414786 SGIP1Q9BQI5 828 aa18.12■□□□□ 0.49
SHANK3-202ENST00000414786 ZNF860A6NHJ4 632 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 FAM155AB1AL88 458 aaPredicted RBP18.11■□□□□ 0.49
SHANK3-202ENST00000414786 POP4O95707 220 aaKnown RBP18.11■□□□□ 0.49
SHANK3-202ENST00000414786 PAOXQ6QHF9 649 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 CPSF7Q8N684 471 aaKnown RBP18.11■□□□□ 0.49
SHANK3-202ENST00000414786 PRR5-ARHGAP8B1AHC4 643 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 ERI3O43414 337 aaKnown RBP18.11■□□□□ 0.49
SHANK3-202ENST00000414786 MAFO75444 373 aaPredicted RBP18.11■□□□□ 0.49
SHANK3-202ENST00000414786 PTDSS1P48651 473 aaKnown RBP18.11■□□□□ 0.49
SHANK3-202ENST00000414786 CDH15P55291 814 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 ARHGAP8P85298 464 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 DLG3Q92796 817 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 HERC2P3Q9BVR0 1158 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 A0A1W2PRQ8 180 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 ZYG11AQ6WRX3 759 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 CYP2U1Q7Z449 544 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 NET1Q7Z628 596 aaPredicted RBP18.11■□□□□ 0.49
SHANK3-202ENST00000414786 MINDY2Q8NBR6 621 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 FXYD6-FXYD2A0A087WZ82 144 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 PRAMEF12O95522 483 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 REP15Q6BDI9 236 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 GRASPQ7Z6J2 395 aaPredicted RBP18.11■□□□□ 0.49
SHANK3-202ENST00000414786 MIPEPQ99797 713 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 FXYD6Q9H0Q3 95 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 FRMPD4Q14CM0 1322 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 TTMPQ5BVD1 217 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 LAPTM4BQ86VI4 370 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 TOR1AIP2Q8NFQ8 470 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 MEMO1Q9Y316 297 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 NMBRP28336 390 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 BRMS1LQ5PSV4 323 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 HSPBAP1Q96EW2 488 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 GKN1Q9NS71 199 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 PPM1HQ9ULR3 514 aa18.11■□□□□ 0.49
SHANK3-202ENST00000414786 SHOXO15266 292 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 YY2O15391 372 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 DCDC1P59894 354 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 BLMHQ13867 455 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 TTC37Q6PGP7 1564 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 DCDC5Q6ZRR9 648 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 TMEM134Q9H6X4 195 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 ARPC2O15144 300 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 KHKP50053 298 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 S100PBPQ96BU1 408 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 OR8D2Q9GZM6 311 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 C11orf49Q9H6J7 331 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 OR51F1A6NGY5 319 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 INSIG1O15503 277 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 EDN3P14138 238 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 DNAJA1P31689 397 aaKnown RBP18.1■□□□□ 0.49
SHANK3-202ENST00000414786 GALNT10Q86SR1 603 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 CEP76Q8TAP6 659 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 EBNA1BP2Q99848 306 aaKnown RBP18.1■□□□□ 0.49
SHANK3-202ENST00000414786 IRGMA1A4Y4 181 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 C1orf61Q13536 156 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 LAPTM5Q13571 262 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 VARS2Q5ST30 1063 aaKnown RBP18.1■□□□□ 0.49
SHANK3-202ENST00000414786 RAB12Q6IQ22 244 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 PHC3Q8NDX5 983 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 TMEM41AQ96HV5 264 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 TMEM165Q9HC07 324 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 ABCD2Q9UBJ2 740 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 SLC16A5O15375 505 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 MRPL3P09001 348 aaKnown RBP18.1■□□□□ 0.49
SHANK3-202ENST00000414786 LEPRP48357 1165 aaKnown RBP18.1■□□□□ 0.49
SHANK3-202ENST00000414786 CDH4P55283 916 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 HERV-K104P61576 105 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 EXOC3L2Q2M3D2 409 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 ZNF311Q5JNZ3 666 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 APOBEC3HQ6NTF7 200 aaKnown RBP18.1■□□□□ 0.49
SHANK3-202ENST00000414786 VCPIP1Q96JH7 1222 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 GPATCH1Q9BRR8 931 aaKnown RBP18.1■□□□□ 0.49
SHANK3-202ENST00000414786 EBF3Q9H4W6 596 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 TAC3Q9UHF0 121 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 CYTH4Q9UIA0 394 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 SCO2O43819 266 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 ZNF3P17036 446 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 RAB8AP61006 207 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 TMEM225Q6GV28 225 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 HSFY1Q96LI6 401 aa18.1■□□□□ 0.49
SHANK3-202ENST00000414786 M0R129 80 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ENDOUP21128 410 aaKnown RBP18.09■□□□□ 0.49
SHANK3-202ENST00000414786 HEPACAMQ14CZ8 416 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 GPR139Q6DWJ6 353 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 ZNF709Q8N972 641 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 MFSD2AQ8NA29 543 aa18.09■□□□□ 0.49
SHANK3-202ENST00000414786 HEXDCQ8WVB3 486 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms