RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 CACHD1Q5VU97 1274 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 KLC3Q6P597 504 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 FOXR1Q6PIV2 292 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 TMPRSS12Q86WS5 348 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 C4orf33Q8N1A6 199 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 DCBLD1Q8N8Z6 715 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 ANKRD7Q92527 254 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 PYCR2Q96C36 320 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 TSNARE1Q96NA8 513 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 GPR78Q96P69 363 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 OR2A14Q96R47 310 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 ROPN1BQ9BZX4 212 aaPredicted RBP17.12■□□□□ 0.33
SBDS-202ENST00000414306 ROPN1Q9HAT0 212 aaPredicted RBP17.12■□□□□ 0.33
SBDS-202ENST00000414306 KLK13Q9UKR3 277 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 POMT2Q9UKY4 750 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 KLHL20Q9Y2M5 609 aa17.12■□□□□ 0.33
SBDS-202ENST00000414306 PMS2P1A4D2B8 440 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 C9P02748 559 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 ERGP11308 486 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 SLC26A3P40879 764 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 AP1S2P56377 157 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 YBX1P67809 324 aaKnown RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 C16orf72Q14CZ0 275 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 TGFBIQ15582 683 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 THEMIS2Q5TEJ8 643 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 AGTRAPQ6RW13 159 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 SPESP1Q6UW49 350 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 CCDC91Q7Z6B0 441 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 CLEC14AQ86T13 490 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 GALNT15Q8N3T1 639 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 RIBC1Q8N443 379 aaPredicted RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 STAG3L4Q8TBR4 150 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 TMEM74Q96NL1 305 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 MIPEPQ99797 713 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 CD274Q9NZQ7 290 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 LGALS13Q9UHV8 139 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 NOVA2Q9UNW9 492 aaKnown RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 WDFY3Q8IZQ1 3526 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 IGHV5-51A0A0C4DH38 117 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 A0A1W2PPV9 198 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 E7ENX8 843 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 PRAMEF10O60809 474 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 HGFP14210 728 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 RPA3P35244 121 aaPredicted RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 TBPL1P62380 186 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 TAP2Q03519 686 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 ZFP36L1Q07352 338 aaKnown RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 NAE1Q13564 534 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 KIR2DS3Q14952 304 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 ACAP2Q15057 778 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 RASA2Q15283 850 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 SF1Q15637 639 aaKnown RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 ZXDCQ2QGD7 858 aaPredicted RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 C16orf46Q6P387 395 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 TMPRSS7Q7RTY8 843 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 SRRM1Q8IYB3 904 aaKnown RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 FLVCR1-AS1Q8TAF5 88 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 SMPDL3AQ92484 453 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 CABS1Q96KC9 395 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 ATOH8Q96SQ7 321 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 DPYSL5Q9BPU6 564 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 TMEM109Q9BVC6 243 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 RAB33BQ9H082 229 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
SBDS-202ENST00000414306 XPR1Q9UBH6 696 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 EPHA6Q9UF33 1036 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 TAC3Q9UHF0 121 aa17.11■□□□□ 0.33
SBDS-202ENST00000414306 TLCD2A6NGC4 264 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 SLC9B1P1A6NJY1 282 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 TK2O00142 265 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 MATN2O00339 956 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 RGS16O15492 202 aaPredicted RBP17.1■□□□□ 0.33
SBDS-202ENST00000414306 KERAO60938 352 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 S100BP04271 92 aaPredicted RBP17.1■□□□□ 0.33
SBDS-202ENST00000414306 ANXA5P08758 320 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 ST6GAL1P15907 406 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 KRT4P19013 534 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 OAS2P29728 719 aaKnown RBP17.1■□□□□ 0.33
SBDS-202ENST00000414306 ARHGAP19Q14CB8 494 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 CLPPQ16740 277 aaPredicted RBP17.1■□□□□ 0.33
SBDS-202ENST00000414306 TECRLQ5HYJ1 363 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 C3orf38Q5JPI3 329 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 FAM129CQ86XR2 697 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 ESAMQ96AP7 390 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 FBXL8Q96CD0 374 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 SCNM1Q9BWG6 230 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 STRADBQ9C0K7 418 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 CCDC177Q9NQR7 707 aaPredicted RBP17.1■□□□□ 0.33
SBDS-202ENST00000414306 WWOXQ9NZC7 414 aa17.1■□□□□ 0.33
SBDS-202ENST00000414306 ZNF839A8K0R7 811 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 COL6A2P12110 1019 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 CCKBRP32239 447 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 HSD17B2P37059 387 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 KCNAB1Q14722 419 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 TSNAXIP1Q2TAA8 658 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 TRABD2AQ86V40 505 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 LRRC56Q8IYG6 542 aaPredicted RBP17.09■□□□□ 0.33
SBDS-202ENST00000414306 HMGCLL1Q8TB92 370 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 ACMSDQ8TDX5 336 aa17.09■□□□□ 0.33
SBDS-202ENST00000414306 RUFY1Q96T51 708 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms