RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GKN1Q9NS71 199 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 FGF21Q9NSA1 209 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 KCNJ14Q9UNX9 436 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 MYO5CQ9NQX4 1742 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 FGD6Q6ZV73 1430 aa3.44□□□□□ -1.86
HMGB1P11-201ENST00000413899 SAMD9LQ8IVG5 1584 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 PLB1Q6P1J6 1458 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 DKC1O60832 514 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 SLCO2B1O94956 709 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 CELF2O95319 508 aaKnown RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 EML2O95834 649 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 PAK4O96013 591 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 CD48P09326 243 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 FAM157CP0CG43 387 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 IGHV4-31P0DP07 118 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 HAPLN1P10915 354 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 HSPA8P11142 646 aaKnown RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 GNB3P16520 340 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 EEF1B2P24534 225 aaKnown RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 CHRNB4P30926 498 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 PTGER4P35408 488 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 LHX1P48742 406 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 NR0B1P51843 470 aaKnown RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 HERV-K104P61576 105 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 UGT3A2Q3SY77 523 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 PDLIM3Q53GG5 364 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 CYP4A22Q5TCH4 519 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 C11orf63Q6NUN7 778 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 CHST3Q7LGC8 479 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 MARVELD2Q8N4S9 558 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 SYN2Q92777 582 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 TMEM143Q96AN5 459 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 MOB3AQ96BX8 217 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 RMDN1Q96DB5 314 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 GIMAP5Q96F15 307 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 NSL1Q96IY1 281 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 LITAFQ99732 161 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 SLC25A23Q9BV35 468 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 NUP85Q9BW27 656 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 MIS12Q9H081 205 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 OR10A4Q9H209 315 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 S1PR5Q9H228 398 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 ERVMER34-1Q9H9K5 563 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 MDFICQ9P1T7 246 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 CACNG4Q9UBN1 327 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 CFDP1Q9UEE9 299 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 DAPK2Q9UIK4 370 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 POLR1AO95602 1720 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 PTPRKQ15262 1439 aa3.43□□□□□ -1.86
HMGB1P11-201ENST00000413899 ABCC10Q5T3U5 1492 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 DHX57Q6P158 1386 aaKnown RBP3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 CCNB3Q8WWL7 1395 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 URADA6NGE7 173 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ANKRD61A6NGH8 418 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 SLCO1B7G3V0H7 640 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 CLDN4O14493 209 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 GGPS1O95749 300 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 NGFP01138 241 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ATP5BP06576 529 aaKnown RBP3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 CCDC175P0C221 793 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 SMIM18P0DKX4 95 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 SAGP10523 405 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ACHEP22303 614 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 PTPN3P26045 913 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 MNDAP41218 407 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 WNT5AP41221 380 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 MAPK12P53778 367 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 MAZP56270 477 aaKnown RBP3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 RBPJQ06330 500 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 CUL3Q13618 768 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 TEAD2Q15562 447 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ODF4Q2M2E3 257 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 PHLDA2Q53GA4 152 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ARHGAP11AQ6P4F7 1023 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 GSG1LQ6UXU4 331 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 C15orf39Q6ZRI6 1047 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 SH2D5Q6ZV89 423 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 NUP54Q7Z3B4 507 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 CCDC186Q7Z3E2 898 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 PIGZQ86VD9 579 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF843Q8N446 348 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 BMPERQ8N8U9 685 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 OR11H4Q8NGC9 324 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 OR52N5Q8NH56 324 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 HPSE2Q8WWQ2 592 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ROBO4Q8WZ75 1007 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF653Q96CK0 615 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 CNDP2Q96KP4 475 aaKnown RBP3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 LRR1Q96L50 414 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 FSD1Q9BTV5 496 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 PITPNM3Q9BZ71 974 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 TRPV4Q9HBA0 871 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 CCDC177Q9NQR7 707 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 INTS9Q9NV88 658 aaKnown RBP3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 RPS6KL1Q9Y6S9 549 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 ABCC2Q92887 1545 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 MYOM3Q5VTT5 1437 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 AKNAQ7Z591 1439 aa3.42□□□□□ -1.86
HMGB1P11-201ENST00000413899 STK36Q9NRP7 1315 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms