RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 EDEM2Q9BV94 578 aa18.07■□□□□ 0.48
CIRBP-202ENST00000413636 NUF2Q9BZD4 464 aa18.07■□□□□ 0.48
CIRBP-202ENST00000413636 WASH6PQ9NQA3 447 aa18.07■□□□□ 0.48
CIRBP-202ENST00000413636 STK38LQ9Y2H1 464 aa18.07■□□□□ 0.48
CIRBP-202ENST00000413636 CFAP20Q9Y6A4 193 aaKnown RBP18.07■□□□□ 0.48
CIRBP-202ENST00000413636 TRBV23OR9-2A0A075B6M9 112 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 IFRD1O00458 451 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-202ENST00000413636 SLC22A2O15244 555 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 SIX3O95343 332 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-202ENST00000413636 GIMD1P0DJR0 217 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 F3P13726 295 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 TGM1P22735 817 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 ACADLP28330 430 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 HALP42357 657 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 MNAT1P51948 309 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 PCBP2Q15366 365 aaKnown RBP eCLIP18.06■□□□□ 0.48
CIRBP-202ENST00000413636 CAPRIN2Q6IMN6 1127 aaKnown RBP18.06■□□□□ 0.48
CIRBP-202ENST00000413636 TTC23LQ6PF05 361 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 PRR23CQ6ZRP0 262 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 ASCL5Q7RTU5 278 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 PDPRQ8NCN5 879 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 CEP70Q8NHQ1 597 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 CFAP61Q8NHU2 1237 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 ZNF483Q8TF39 744 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-202ENST00000413636 ZDHHC1Q8WTX9 485 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 PATE1Q8WXA2 126 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 INSM2Q96T92 566 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-202ENST00000413636 MEAF6Q9HAF1 191 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 ARL8BQ9NVJ2 186 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 DNAAF2Q9NVR5 837 aaKnown RBP18.06■□□□□ 0.48
CIRBP-202ENST00000413636 TAGLN3Q9UI15 199 aa18.06■□□□□ 0.48
CIRBP-202ENST00000413636 OR52A4PA6NMU1 304 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 CDX4O14627 284 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 SLC16A5O15375 505 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 PCDHGA12O60330 932 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 C8GP07360 202 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 ENO2P09104 434 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 NQO1P15559 274 aaKnown RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 NCF2P19878 526 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 INHBCP55103 352 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 CDC16Q13042 620 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 PPP1R3AQ16821 1122 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 IYDQ6PHW0 289 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 EFL1Q7Z2Z2 1120 aaKnown RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 NAGSQ8N159 534 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 ACTRT2Q8TDY3 377 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 C12orf66Q96MD2 445 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 TRIM54Q9BYV2 358 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 MID1IP1Q9NPA3 183 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 PFDN4Q9NQP4 134 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 ARMCX1Q9P291 453 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 ARID1BQ8NFD5 2236 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 NCF1BA6NI72 391 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 NCF1CA8MVU1 366 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 UBFD1O14562 309 aaKnown RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 GIPC1O14908 333 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 ZNF883P0CG24 379 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 NCF1P14598 390 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 MAPK9P45984 424 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 SH3BP2P78314 561 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 PDCD2Q16342 344 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 RPE65Q16518 533 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 LSM12Q3MHD2 195 aaKnown RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 AASDHQ4L235 1098 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 C6orf132Q5T0Z8 1188 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 SULT1C3Q6IMI6 304 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 DUS1LQ6P1R4 473 aaKnown RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 CHCHD4Q8N4Q1 142 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 TFGQ92734 400 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 SLC7A6OSQ96CW6 309 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 CMTM5Q96DZ9 223 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 PRR11Q96HE9 360 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 IMP3Q9NV31 184 aaKnown RBP18.05■□□□□ 0.48
CIRBP-202ENST00000413636 NLGN3Q9NZ94 848 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 PCTPQ9UKL6 214 aa18.05■□□□□ 0.48
CIRBP-202ENST00000413636 AZIN1O14977 448 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 MATN4O95460 622 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 EPHA3P29320 983 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 PRDX6P30041 224 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 CDH13P55290 713 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 CDKL1Q00532 357 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 SP140Q13342 867 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 RPS27LQ71UM5 84 aaKnown RBP18.04■□□□□ 0.48
CIRBP-202ENST00000413636 PHC3Q8NDX5 983 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 TRPC4APQ8TEL6 797 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 FOPNLQ96NB1 174 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 OR52B2Q96RD2 323 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 BTBD10Q9BSF8 475 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 TMEM9BQ9NQ34 198 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.04■□□□□ 0.48
CIRBP-202ENST00000413636 ZNF624Q9P2J8 865 aaPredicted RBP18.04■□□□□ 0.48
CIRBP-202ENST00000413636 PTBP2Q9UKA9 531 aaKnown RBP18.04■□□□□ 0.48
CIRBP-202ENST00000413636 ASF1AQ9Y294 204 aa18.04■□□□□ 0.48
CIRBP-202ENST00000413636 DNAH14Q0VDD8 3507 aa18.03■□□□□ 0.48
CIRBP-202ENST00000413636 PABPN1LA6NDY0 278 aaKnown RBP18.03■□□□□ 0.48
CIRBP-202ENST00000413636 E9PBE3 544 aa18.03■□□□□ 0.48
CIRBP-202ENST00000413636 TRIM38O00635 465 aa18.03■□□□□ 0.48
CIRBP-202ENST00000413636 NOBOXO60393 691 aa18.03■□□□□ 0.48
CIRBP-202ENST00000413636 KLHL41O60662 606 aa18.03■□□□□ 0.48
CIRBP-202ENST00000413636 ALPPL2P10696 532 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms