RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ZFP69BQ9UJL9 534 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 APOBEC2Q9Y235 224 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 SLC22A14Q9Y267 594 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 BTRCQ9Y297 605 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 TDRKHQ9Y2W6 561 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 TIMM22Q9Y584 194 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 PTGDR2Q9Y5Y4 395 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 HEBP2Q9Y5Z4 205 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 MUC3AQ02505 3323 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 TNRC6BQ9UPQ9 1833 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 TP53BP1Q12888 1972 aaPredicted RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 KCNE1BA0A087WTH5 132 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 ZNF839A8K0R7 811 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 TLR4O00206 839 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 VILLO15195 856 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 UGDHO60701 494 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 PRAMEF4O60810 478 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 CCDC22O60826 627 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 UBOX5O94941 541 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 CLDN9O95484 217 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 CSF2P04141 144 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 SERPINA6P08185 405 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 CELA2BP08218 269 aaPredicted RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 F3P13726 295 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 HGFP14210 728 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 CCND1P24385 295 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 HMOX2P30519 316 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 HSD17B2P37059 387 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 HTR6P50406 440 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 RAB28P51157 221 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 BLKP51451 505 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 AFF3P51826 1226 aaKnown RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 CSTF1Q05048 431 aaKnown RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 PCDH1Q08174 1060 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 PRKG2Q13237 762 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 SRSF5Q13243 272 aaKnown RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 E2F2Q14209 437 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 FASTKQ14296 549 aaKnown RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 CYP2A13Q16696 494 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 LSM12Q3MHD2 195 aaKnown RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 ZNF542PQ5EBM4 170 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 SPDYAQ5MJ70 313 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 PRAMEF14Q5SWL7 426 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 PRAMEF9Q5VWM5 478 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 PRAMEF13Q5VWM6 474 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 LYSMD4Q5XG99 296 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 FAM91A1Q658Y4 838 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 PMS2CLQ68D20 193 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 GRHL2Q6ISB3 625 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 RNF165Q6ZSG1 346 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 LPCAT2Q7L5N7 544 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 MILR1Q7Z6M3 343 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 YTHDF3Q7Z739 585 aaKnown RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 C11orf74Q86VG3 221 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 MYLK4Q86YV6 388 aaPredicted RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 DDIASQ8IXT1 998 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 GBP7Q8N8V2 638 aaPredicted RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 LMNTD1Q8N9Z9 388 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 L3MBTL4Q8NA19 623 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 LINC01555Q8NAE3 123 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 OR52E1Q8NGJ3 308 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 METTL6Q8TCB7 284 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 ACTRT2Q8TDY3 377 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 GAB3Q8WWW8 586 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 MAGEB10Q96LZ2 347 aaPredicted RBP6.44□□□□□ -1.38
VPS41-204ENST00000413141 C3orf30Q96M34 536 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 CAMK1GQ96NX5 476 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 FERD3LQ96RJ6 166 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 NRTNQ99748 197 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 RAB11FIP5Q9BXF6 653 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 ZNF385DQ9H6B1 395 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 KIR3DX1Q9H7L2 352 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 TAAR2Q9P1P5 351 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 ARMCX1Q9P291 453 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 POLG2Q9UHN1 485 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 ICKQ9UPZ9 632 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 SH2B3Q9UQQ2 575 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 RNF11Q9Y3C5 154 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 CEP192Q8TEP8 1941 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 BDP1A6H8Y1 2624 aa6.44□□□□□ -1.38
VPS41-204ENST00000413141 ANKRD12Q6UB98 2062 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 KIR2DS5A0A0G2JLQ3 304 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 PRAMEF33A0A0G2JMD5 474 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 A0A0G2JNG1 304 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 ATP6AP2A0A1C7CYW4 349 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 A0A1W2PPV9 198 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 KIR2DS3K7RE56 304 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 MANBAO00462 879 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 FFAR3O14843 346 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 CLGNO14967 610 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 BCAT2O15382 392 aaPredicted RBP6.43□□□□□ -1.38
VPS41-204ENST00000413141 GPR42O15529 346 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 KDM1AO60341 852 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 ATP6AP2O75787 350 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 WFS1O76024 890 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 KIAA0754O94854 1291 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 LINC00032P0C843 101 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 PRR35P0CG20 571 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 CTSEP14091 401 aa6.43□□□□□ -1.38
VPS41-204ENST00000413141 JUPP14923 745 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms