RNA–Protein interactions for RNA: ENST00000411249.1

RNU6-1199P-201, Transcript of RNA, U6 small nuclear 1199, pseudogene, humanhuman

BASIC

Gene RNU6-1199P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1199P-201ENST00000411249 MITFO75030 526 aaPredicted RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 MED24O75448 989 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SMIM18P0DKX4 95 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 RPL35AP18077 110 aaKnown RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 GABRB1P18505 474 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CHMP24386 653 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ZFP36L2P47974 494 aaKnown RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LMAN1P49257 510 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 HLCSP50747 726 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ARSEP51690 589 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SETQ01105 290 aaPredicted RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 TAF10Q12962 218 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CDH18Q13634 790 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 NR1D2Q14995 579 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 EFTUD2Q15029 972 aaKnown RBP eCLIP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ZNF74Q16587 644 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 PDLIM3Q53GG5 364 aaPredicted RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 EIPR1Q53HC9 387 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 IGSF11Q5DX21 431 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SLC35D3Q5M8T2 416 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LCLAT1Q6UWP7 414 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 VITQ6UXI7 678 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 FRRS1Q6ZNA5 592 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ZER1Q7Z7L7 766 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ADCK1Q86TW2 530 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 TMEM173Q86WV6 379 aaPredicted RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 MARCH9Q86YJ5 346 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LGI2Q8N0V4 545 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 PAPD5Q8NDF8 572 aaKnown RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 OR1L3Q8NH93 324 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 USP6NLQ92738 828 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SERAC1Q96JX3 654 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CNOT6LQ96LI5 555 aaKnown RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ZNF597Q96LX8 424 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LGMNQ99538 433 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 RAD9AQ99638 391 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CHCHD5Q9BSY4 110 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SHARPINQ9H0F6 387 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 GNB4Q9HAV0 340 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 GKN1Q9NS71 199 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 OLA1Q9NTK5 396 aaKnown RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SEPT11Q9NVA2 429 aaKnown RBP1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 AASSQ9UDR5 926 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CLIP2Q9UDT6 1046 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 BAIAP2L1Q9UHR4 511 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 STUB1Q9UNE7 303 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 GTF2A1LQ9UNN4 478 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CROCCQ5TZA2 2017 aa1.6□□□□□ -2.15
RNU6-1199P-201ENST00000411249 PRRC2AP48634 2157 aaKnown RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ANKUB1A6NFN9 424 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SNURFLB1AK76 121 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SRRM5B3KS81 715 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 B4DLN1 442 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SHISA9B4DS77 424 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 PTGES3LE9PB15 166 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 HAT1O14929 419 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 GALR3O60755 368 aaPredicted RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LRCH4O75427 683 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 TMEM63AO94886 807 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 WDPCPO95876 746 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 KRTAP1-4P0C5Y4 121 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 FOLR2P14207 255 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 IL4RP24394 825 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 PTPN3P26045 913 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CLCN4P51793 760 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 MRPL12P52815 198 aaKnown RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 DHODHQ02127 395 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 GUCY2DQ02846 1103 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ZNF415Q09FC8 603 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LMOD3Q0VAK6 560 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 TMEM132DQ14C87 1099 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 MS4A18Q3C1V0 323 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 FHL5Q5TD97 284 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 C11orf63Q6NUN7 778 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 GDPGP1Q6ZNW5 385 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 TIPARPQ7Z3E1 657 aaKnown RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LDB1Q86U70 411 aaPredicted RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 KRTAP11-1Q8IUC1 163 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ABCA7Q8IZY2 2146 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 FGFRL1Q8N441 504 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SUMF1Q8NBK3 374 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SLC37A3Q8NCC5 494 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 MCUQ8NE86 351 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 C9orf43Q8TAL5 461 aaPredicted RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 C11orf45Q8TAV5 145 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 APOBEC4Q8WW27 367 aaKnown RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SSMEM1Q8WWF3 244 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 RFT1Q96AA3 541 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CNRIP1Q96F85 164 aaPredicted RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 C7orf26Q96N11 449 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LINC00167Q96N53 147 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SFXN2Q96NB2 322 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 ZIM3Q96PE6 472 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 NEK1Q96PY6 1258 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 CDRT15Q96T59 188 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 LPAR4Q99677 370 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 SPATC1LQ9H0A9 340 aa1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 PPIL3Q9H2H8 161 aaKnown RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 PNNQ9H307 717 aaKnown RBP1.59□□□□□ -2.15
RNU6-1199P-201ENST00000411249 MUC13Q9H3R2 512 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms