RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 UBXN2BQ14CS0 331 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 MAPRE2Q15555 327 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 SKIDA1Q1XH10 827 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 MST1LQ2TV78 715 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 NRN1LQ496H8 165 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 USP39Q53GS9 565 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 METTL21CQ5VZV1 264 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 BSPRYQ5W0U4 402 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PM20D1Q6GTS8 502 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 OR6B2Q6IFH4 312 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ARHGAP11AQ6P4F7 1023 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ZCCHC12Q6PEW1 402 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TUBA3EQ6PEY2 450 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 LINC00696Q6ZRV3 163 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 MARK2Q7KZI7 788 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TMPRSS7Q7RTY8 843 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PATL1Q86TB9 770 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TMEM151BQ8IW70 566 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 SFTPA1Q8IWL2 248 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CNTN4Q8IWV2 1026 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 BBS7Q8IWZ6 715 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 SLC35F6Q8N357 371 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TMEM105Q8N8V8 129 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 FAM181AQ8N9Y4 354 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 OLIG1Q8TAK6 271 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CALML6Q8TD86 181 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 HCAR2Q8TDS4 363 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 RNF139Q8WU17 664 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 OSCP1Q8WVF1 389 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CPA5Q8WXQ8 436 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 RAPGEF5Q92565 580 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PRCCQ92733 491 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TUBGCP3Q96CW5 907 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 DGCR14Q96DF8 476 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 P2RY11Q96G91 374 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 MEGF10Q96KG7 1140 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 HSFY1Q96LI6 401 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ZIM3Q96PE6 472 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 FAM111AQ96PZ2 611 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PCDHB18PQ96TA0 734 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 FAM83CQ9BQN1 747 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 NEURL2Q9BR09 285 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 C11orf70Q9BRQ4 267 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 C1QTNF1Q9BXJ1 281 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CPEB1Q9BZB8 566 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TTYH3Q9C0H2 523 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ACSS3Q9H6R3 686 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ZFP64Q9NPA5 681 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CD93Q9NPY3 652 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 FSCN3Q9NQT6 498 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CNGB3Q9NQW8 809 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 POLE3Q9NRF9 147 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 LANCL2Q9NS86 450 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ABCB8Q9NUT2 735 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ARMC1Q9NVT9 282 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 BEX4Q9NWD9 120 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 DUS2Q9NX74 493 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ARHGEF38Q9NXL2 777 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 SIDT1Q9NXL6 827 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 COX16Q9P0S2 106 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 LNPEPQ9UIQ6 1025 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 APPL1Q9UKG1 709 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ACSL6Q9UKU0 697 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CAPN11Q9UMQ6 739 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 NDRG2Q9UN36 371 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PPIEQ9UNP9 301 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CAB39Q9Y376 341 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 SESN1Q9Y6P5 492 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 HELZP42694 1942 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 A0A0G2JPF8 293 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 LOC102723971A0A1B0GUV8 181 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 A0A1W2PQC6 194 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ZSCAN5CA6NGD5 496 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 OR5K4A6NMS3 321 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PRR33A8MZF0 331 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 HNRNPCL3B7ZW38 293 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 GOLGA8MH3BSY2 632 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TRAFD1O14545 582 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TRDMT1O14717 391 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 HGSO14964 777 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 TRIM24O15164 1050 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CCNT2O60583 730 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DNAJB5O75953 348 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 STC2O76061 302 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PDE5AO76074 875 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 RECQL5O94762 991 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 STAMBPO95630 424 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 MOCS2O96007 188 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 KLKB1P03952 638 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 GYPCP04921 128 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 DCNP07585 359 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 PLEKP08567 350 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 KRT16P08779 473 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 HNRNPCL4P0DMR1 293 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CHRNB1P11230 501 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ZNF12P17014 697 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 IL32P24001 234 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 CORO1AP31146 461 aaKnown RBP4.47□□□□□ -1.69
SF3B1-202ENST00000409915 SLC5A2P31639 672 aa4.47□□□□□ -1.69
SF3B1-202ENST00000409915 ADRA1BP35368 520 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms