RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SLC12A9Q9BXP2 914 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 TRIM54Q9BYV2 358 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 ULBP3Q9BZM4 244 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 TWSG1Q9GZX9 223 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 CHRNA10Q9GZZ6 450 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 APMAPQ9HDC9 416 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 FGF21Q9NSA1 209 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 SPHK1Q9NYA1 384 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 TMEM184BQ9Y519 407 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-205ENST00000409810 PTPRQQ9UMZ3 2332 aa10.53□□□□□ -0.72
CHMP3-205ENST00000409810 CXorf49A8MYA2 514 aaPredicted RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 RAD1O60671 282 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 STK17BO94768 372 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 ENO2P09104 434 aaPredicted RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 PVRP15151 417 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 ECHS1P30084 290 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 CMPK1P30085 196 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 RPA3P35244 121 aaPredicted RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 PNLIPRP1P54315 467 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 AP1S2P56377 157 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 TAS2R39P59534 338 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 CLN3Q13286 438 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 MAP7Q14244 749 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 USP10Q14694 798 aaKnown RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 KCNAB1Q14722 419 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 SF1Q15637 639 aaKnown RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 CCSMST1Q4G0I0 132 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 MANEAQ5SRI9 462 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 TEX35Q5T0J7 233 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 TRIM73Q86UV7 250 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 ZFAND4Q86XD8 727 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 SYTL1Q8IYJ3 562 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 NLGN4XQ8N0W4 816 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 C2orf73Q8N5S3 287 aaPredicted RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 ESX1Q8N693 406 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 IL22RA1Q8N6P7 574 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 NLGN4YQ8NFZ3 816 aaPredicted RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 FLVCR1-AS1Q8TAF5 88 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 DENND1AQ8TEH3 1009 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 SMPDL3AQ92484 453 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 ANKRD7Q92527 254 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 PDLIM5Q96HC4 596 aaKnown RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 CCDC138Q96M89 665 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 CYTH2Q99418 400 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 GPR22Q99680 433 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 MCMBPQ9BTE3 642 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 EFHD1Q9BUP0 239 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 PCBD2Q9H0N5 130 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 CDC42EP4Q9H3Q1 356 aaKnown RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 PARVBQ9HBI1 364 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 GPAMQ9HCL2 828 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 UTP6Q9NYH9 597 aaKnown RBP10.52□□□□□ -0.73
CHMP3-205ENST00000409810 NINJ2Q9NZG7 142 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 SERTAD3Q9UJW9 196 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 NFU1Q9UMS0 254 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 LAMA5O15230 3695 aa10.52□□□□□ -0.73
CHMP3-205ENST00000409810 ESPNB1AK53 854 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 TMEM150CB9EJG8 249 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 PIAS1O75925 651 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 KIAA0754O94854 1291 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ACSL3O95573 720 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 SLC16A8O95907 504 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 C1QAP02745 245 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 STMN1P16949 149 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 MAGP20916 626 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ITGA1P56199 1179 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 TMPRSS3P57727 454 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 TSTA3Q13630 321 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-205ENST00000409810 GPR19Q15760 415 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ZC3H12BQ5HYM0 836 aaKnown RBP10.51□□□□□ -0.73
CHMP3-205ENST00000409810 TAOK1Q7L7X3 1001 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ADAMTSL2Q86TH1 951 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 DTX1Q86Y01 620 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 TMEM126BQ8IUX1 230 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 GPR135Q8IZ08 494 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 CACNA2D3Q8IZS8 1091 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 LMNTD1Q8N9Z9 388 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ATL1Q8WXF7 558 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ZUFSPQ96AP4 578 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 KIAA1143Q96AT1 154 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ZNF501Q96CX3 271 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-205ENST00000409810 SLC7A5P2Q9GIP4 190 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 KLHL25Q9H0H3 589 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ACSS3Q9H6R3 686 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 MRPS30Q9NP92 439 aaKnown RBP10.51□□□□□ -0.73
CHMP3-205ENST00000409810 IRAK4Q9NWZ3 460 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 ANKMY1Q9P2S6 941 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 PILRAQ9UKJ1 303 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 NOVA2Q9UNW9 492 aaKnown RBP10.51□□□□□ -0.73
CHMP3-205ENST00000409810 IKBKGQ9Y6K9 419 aa10.51□□□□□ -0.73
CHMP3-205ENST00000409810 PKD1L2Q7Z442 2459 aa10.5□□□□□ -0.73
CHMP3-205ENST00000409810 A0A087WUV0 522 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-205ENST00000409810 KRT87PA6NCN2 255 aa10.5□□□□□ -0.73
CHMP3-205ENST00000409810 TARM1B6A8C7 271 aa10.5□□□□□ -0.73
CHMP3-205ENST00000409810 E7EQ34 232 aa10.5□□□□□ -0.73
CHMP3-205ENST00000409810 PRICKLE3O43900 615 aaPredicted RBP10.5□□□□□ -0.73
CHMP3-205ENST00000409810 CPNE3O75131 537 aaKnown RBP10.5□□□□□ -0.73
CHMP3-205ENST00000409810 SCRG1O75711 98 aa10.5□□□□□ -0.73
CHMP3-205ENST00000409810 TSPAN12O95859 305 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms