RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ERI2A8K979 691 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 MATN3O15232 486 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 UGT1A9O60656 530 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 MTX2O75431 263 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 NEFHP12036 1026 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 ZNF7P17097 686 aaPredicted RBP12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 MX2P20592 715 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 PSMB4P28070 264 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 DCTP40126 519 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 CAPZBP47756 277 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 PPIDQ08752 370 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 BMPR2Q13873 1038 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 GPR18Q14330 331 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 UGT8Q16880 541 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 WLSQ5T9L3 541 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 FAM69BQ5VUD6 431 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 FAM91A1Q658Y4 838 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 IRGCQ6NXR0 463 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 CDHR3Q6ZTQ4 885 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 ZNF547Q8IVP9 402 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 TRIM48Q8IWZ4 208 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 CCNYQ8ND76 341 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 RFWD2Q8NHY2 731 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 TCTN2Q96GX1 697 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 SPATA16Q9BXB7 569 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 MFRPQ9BY79 579 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 UGT1A7Q9HAW7 530 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 UGT1A10Q9HAW8 530 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 UGT1A8Q9HAW9 530 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 CUEDC1Q9NWM3 386 aaPredicted RBP12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 PKD2L2Q9NZM6 624 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 TMPRSS11EQ9UL52 423 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 WDR37Q9Y2I8 494 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 PCSK5Q92824 1860 aa12.36□□□□□ -0.43
CHRNA1-205ENST00000409542 ENO4A6NNW6 628 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 C21orf140B9A014 251 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 SLC25A14O95258 325 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 AP2A1O95782 977 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 EBLN1P0CF75 366 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 T-ENOLP0DO92 83 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 PTPN3P26045 913 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 MGAT1P26572 445 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 PTPN4P29074 926 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 SERPINB6P35237 376 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 PGDP52209 483 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 ARFIP2P53365 341 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 GALNT2Q10471 571 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 CRYMQ14894 314 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 INSCQ1MX18 579 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 SPANXN3Q5MJ09 141 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 LCN10Q6JVE6 187 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 ABRAXAS1Q6UWZ7 409 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 PACS1Q6VY07 963 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 CCDC91Q7Z6B0 441 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 CLNKQ7Z7G1 428 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 RAVER1Q8IY67 606 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 KIF2BQ8N4N8 673 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 HDAC11Q96DB2 347 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 C19orf60Q96EN9 201 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 VAT1Q99536 393 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 MLPHQ9BV36 600 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 ING2Q9H160 280 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 EPHA6Q9UF33 1036 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 BAIAP2L1Q9UHR4 511 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 TRHDEQ9UKU6 1024 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 RPL26L1Q9UNX3 145 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 TRIM33Q9UPN9 1127 aa12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 PCDHGA9Q9Y5G4 932 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-205ENST00000409542 PDZK1P1A8MUH7 402 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 ANKRD66B4E2M5 251 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 BPGMP07738 259 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 PIRTP0C851 137 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 CD86P42081 329 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 SESN2P58004 480 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 TUBB3Q13509 450 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 GALNT3Q14435 633 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 KRT72Q14CN4 511 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 TEX44Q53QW1 395 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 PRAMEF17Q5VTA0 474 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 ITPRIPL1Q6GPH6 555 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 JMJD6Q6NYC1 403 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 CASC4Q6P4E1 433 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 C11orf96Q7Z7L8 435 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 AVL9Q8NBF6 648 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 SIDT2Q8NBJ9 832 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 GPR150Q8NGU9 434 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 PRR7Q8TB68 274 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 SLC41A2Q96JW4 573 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 MAP3K3Q99759 626 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 TRIM56Q9BRZ2 755 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 TMEM120AQ9BXJ8 343 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 GBA3Q9H227 469 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 LRRC40Q9H9A6 602 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 KCNK13Q9HB14 408 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 ACSS2Q9NR19 701 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 PCMTD2Q9NV79 361 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 SYBUQ9NX95 663 aa12.34□□□□□ -0.43
CHRNA1-205ENST00000409542 SEMA5BQ9P283 1151 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms