RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 WDR48Q8TAF3 677 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 LCN9Q8WX39 176 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 FBXL8Q96CD0 374 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 CCDC126Q96EE4 140 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 FAM111AQ96PZ2 611 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 PKP4Q99569 1192 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 SLC38A3Q99624 504 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 SELENOSQ9BQE4 189 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 CCDC3Q9BQI4 270 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 CNOT10Q9H9A5 744 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 LRIT1Q9P2V4 623 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 EMCNQ9ULC0 261 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 RP1P56715 2156 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 NCF1BA6NI72 391 aaPredicted RBP16■□□□□ 0.15
TSPAN4-208ENST00000409531 NCF1CA8MVU1 366 aaPredicted RBP16■□□□□ 0.15
TSPAN4-208ENST00000409531 TARM1B6A8C7 271 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 PPM1DO15297 605 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 SLC16A8O95907 504 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 PROS1P07225 676 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 MYL2P10916 166 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 NCF1P14598 390 aaPredicted RBP16■□□□□ 0.15
TSPAN4-208ENST00000409531 ATP5F1P24539 256 aaPredicted RBP16■□□□□ 0.15
TSPAN4-208ENST00000409531 EPHA4P54764 986 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 GRB7Q14451 532 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 KLHL35Q6PF15 583 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 ZNF438Q7Z4V0 828 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 SLC22A9Q8IVM8 553 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 FBXO39Q8N4B4 442 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 TMEM151AQ8N4L1 468 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 ARMC2Q8NEN0 867 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 SREK1Q8WXA9 508 aaKnown RBP16■□□□□ 0.15
TSPAN4-208ENST00000409531 SRMSQ9H3Y6 488 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 OR6C2Q9NZP2 312 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 SLC17A7Q9P2U7 560 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 RNF215Q9Y6U7 377 aa16■□□□□ 0.15
TSPAN4-208ENST00000409531 KLK8O60259 260 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 IPO13O94829 963 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 SBK3P0C264 359 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 ERGP11308 486 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 MTHFD2P13995 350 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 HOXB3P14651 431 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 CPA3P15088 417 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 NR1D1P20393 614 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 CCND1P24385 295 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 IMPA1P29218 277 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 PKLRP30613 574 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 PNLIPRP1P54315 467 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 ALDH18A1P54886 795 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 PPP2R2AP63151 447 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 ASPHQ12797 758 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 NR1D2Q14995 579 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 CCSMST1Q4G0I0 132 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 ZYG11AQ6WRX3 759 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 AMIGO1Q86WK6 493 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 SYTL1Q8IYJ3 562 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 ARFGAP2Q8N6H7 521 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 OR2L8Q8NGY9 312 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 HMGCLL1Q8TB92 370 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 CCDC74AQ96AQ1 378 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 RHBDF1Q96CC6 855 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 EPB41L1Q9H4G0 881 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 WWOXQ9NZC7 414 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 STOX2Q9P2F5 926 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 COPG2Q9UBF2 871 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 TNPO3Q9Y5L0 923 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 AKAP13Q12802 2813 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 UNC13CQ8NB66 2214 aa15.99■□□□□ 0.15
TSPAN4-208ENST00000409531 PRAMEF33A0A0G2JMD5 474 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 TMEM8BA6NDV4 472 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 STX16-NPEPL1H3BU86 382 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 STX16O14662 325 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 ETV4P43268 484 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 NFKB2Q00653 900 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 CYP2A13Q16696 494 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 PFKFB4Q16877 469 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 HHATQ5VTY9 493 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 METTL2BQ6P1Q9 378 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 AGTRAPQ6RW13 159 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 MBOAT1Q6ZNC8 495 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 ANKRD42Q8N9B4 389 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 KDF1Q8NAX2 398 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 OR4E2Q8NGC2 313 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 ZNF480Q8WV37 535 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 SMPDL3AQ92484 453 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 GRAMD1AQ96CP6 724 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 DEPDC7Q96QD5 511 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 MENTQ9BUN1 341 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 C12orf65Q9H3J6 166 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 KCNK4Q9NYG8 393 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 CIDEBQ9UHD4 219 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 PTBP2Q9UKA9 531 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 PLAGL1Q9UM63 463 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 ICKQ9UPZ9 632 aa15.98■□□□□ 0.15
TSPAN4-208ENST00000409531 A8MT66 165 aa15.97■□□□□ 0.15
TSPAN4-208ENST00000409531 G3V2L1 256 aa15.97■□□□□ 0.15
TSPAN4-208ENST00000409531 NTN3O00634 580 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-208ENST00000409531 UBXN7O94888 489 aa15.97■□□□□ 0.15
TSPAN4-208ENST00000409531 AMD1P17707 334 aa15.97■□□□□ 0.15
TSPAN4-208ENST00000409531 GGT5P36269 586 aa15.97■□□□□ 0.15
TSPAN4-208ENST00000409531 NAA20P61599 178 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms