RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 EMX1Q04741 257 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 NFE2Q16621 373 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 DGUOKQ16854 277 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 TYW3Q6IPR3 259 aaKnown RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 LCN8Q6JVE9 175 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 DDX53Q86TM3 631 aaKnown RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 APCDD1Q8J025 514 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 TMEM132CQ8N3T6 1108 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 ZFP41Q8N8Y5 198 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 PKP4Q99569 1192 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 NRTNQ99748 197 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 DCSTAMPQ9H295 470 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 TFB2MQ9H5Q4 396 aaKnown RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 TIGARQ9NQ88 270 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 GPR83Q9NYM4 423 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 KCNH4Q9UQ05 1017 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 GIT1Q9Y2X7 761 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 PCDHB7Q9Y5E2 793 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 LTBP4Q8N2S1 1624 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 H3BM21 787 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SSX4O60224 188 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ACSL4O60488 711 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 STK16O75716 305 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 PRSS23O95084 383 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 STSP08842 583 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 GSTM1P09488 218 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ZNF865P0CJ78 1059 aaPredicted RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 MSH3P20585 1137 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 RRM2P31350 389 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 HLCSP50747 726 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 CDC42EP1Q00587 391 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ACSM2AQ08AH3 577 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 CARD16Q5EG05 197 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ACSM2BQ68CK6 577 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 TNFAIP8L2Q6P589 184 aaPredicted RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 CROCCP3Q8IVE0 287 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 MINDY1Q8N5J2 469 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 CELF5Q8N6W0 485 aaKnown RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 OR9Q2Q8NGE9 314 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 WFDC5Q8TCV5 224 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 TOP1MTQ969P6 601 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ZNF599Q96NL3 588 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 GFM1Q96RP9 751 aaKnown RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 OR51E2Q9H255 320 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 GIMAP4Q9NUV9 329 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ATAD3AQ9NVI7 634 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ELOVL2Q9NXB9 296 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 PCM1Q15154 2024 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 CNOT3O75175 753 aaKnown RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 TGFB1P01137 390 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 BCKDHAP12694 445 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 DDX5P17844 614 aaKnown RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 DCTP40126 519 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ALDH6A1Q02252 535 aaKnown RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 PRKCZQ05513 592 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 IL10RBQ08334 325 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 GRB14Q14449 540 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 PTCHD3Q3KNS1 767 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 RAB41Q5JT25 222 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 DGKKQ5KSL6 1271 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNX13-201ENST00000409076 SHFQ7M4L6 423 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 TMPRSS11BQ86T26 416 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SCML4Q8N228 414 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 PCNPQ8WW12 178 aaKnown RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 HSH2DQ96JZ2 352 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ZNF583Q96ND8 569 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 TSGA13Q96PP4 275 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 WRAP53Q9BUR4 548 aaKnown RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 TTTY10Q9BZA0 68 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 CEP44Q9C0F1 390 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 NUAK2Q9H093 628 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SLCO3A1Q9UIG8 710 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 A0A1B0GVC2 190 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 A6NIN4 97 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 RGS10O43665 173 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 KRT6AP02538 564 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 KRT6BP04259 564 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 BMP4P12644 408 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 CRHBPP24387 322 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SCNN1AP37088 669 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 CTSKP43235 329 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 BDKRB1P46663 353 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 KRT6CP48668 564 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SLC16A1P53985 500 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 CREMQ03060 361 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
SNX13-201ENST00000409076 RCAN2Q14206 197 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SF3B4Q15427 424 aaKnown RBP eCLIP8.12□□□□□ -1.115e-7■■■■□ 22.6
SNX13-201ENST00000409076 ADPRMQ3LIE5 342 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SPDYE7PQ495Y7 208 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 DDI2Q5TDH0 399 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 DEF8Q6ZN54 512 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ZFAND4Q86XD8 727 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 ISL2Q96A47 359 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 MYO19Q96H55 970 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 VPS35Q96QK1 796 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 TTPALQ9BTX7 342 aa8.12□□□□□ -1.11
SNX13-201ENST00000409076 SORBS1Q9BX66 1292 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms