RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ZNF669Q96BR6 464 aaPredicted RBP18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 SERPINB12Q96P63 405 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 OSBPL9Q96SU4 736 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 SLC25A23Q9BV35 468 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 FAM237BA0A1B0GVD1 139 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 SDR42E2A6NKP2 422 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 MLNP12872 115 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 PAMP19021 973 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 DCDP81605 110 aaKnown RBP18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 ATP1A4Q13733 1029 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 ACSBG2Q5FVE4 666 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 FIGLAQ6QHK4 219 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 PROKR1Q8TCW9 393 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 NAP1L3Q99457 506 aaPredicted RBP18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 NDC1Q9BTX1 674 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 DHRS4Q9BTZ2 278 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 GRPEL1Q9HAV7 217 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 XAB2Q9HCS7 855 aaKnown RBP18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 MLXIPLQ9NP71 852 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 TXLNGQ9NUQ3 528 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 SRPK3Q9UPE1 567 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 PADI2Q9Y2J8 665 aa18.52■□□□□ 0.56
SMARCB1-204ENST00000407422 ZCWPW2A0A1B0GU75 182 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 H3BMM5 538 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 PFDN6O15212 129 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 ZNF185O15231 689 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 CNOT3O75175 753 aaKnown RBP18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 MATN4O95460 622 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 PKMP14618 531 aaKnown RBP18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 MCM3P25205 808 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 OTX2P32243 289 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 GCGRP47871 477 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 PGDP52209 483 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 FOXK1P85037 733 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 FASTKQ14296 549 aaKnown RBP18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 NKAIN1Q4KMZ8 207 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 ARMC3Q5W041 872 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 ZNF470Q6ECI4 717 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 DENND6AQ8IWF6 608 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 ACTRT1Q8TDG2 376 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 FOPNLQ96NB1 174 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 RAB11FIP5Q9BXF6 653 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 KCNF1Q9H3M0 494 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 SLC22A11Q9NSA0 550 aa18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 IFT80Q9P2H3 777 aaPredicted RBP18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 PTRH2Q9Y3E5 179 aaKnown RBP18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 PCDHGA9Q9Y5G4 932 aaKnown RBP18.52■□□□□ 0.55
SMARCB1-204ENST00000407422 LRRK2Q5S007 2527 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 HEATR5BQ9P2D3 2071 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 A0A1W2PPV9 198 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 MAGEB16A2A368 324 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 NRP2O60462 931 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 PHF2O75151 1096 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 ALAS2P22557 587 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 CCNFP41002 786 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 MAGEA3P43357 314 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 MLLT10P55197 1068 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 YBX1P67809 324 aaKnown RBP18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 CTBP1Q13363 440 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 NAT8LQ8N9F0 302 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 HMGCLL1Q8TB92 370 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 SLC30A3Q99726 388 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 MIPEPQ99797 713 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 FBXO6Q9NRD1 293 aaPredicted RBP18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 INTS7Q9NVH2 962 aaKnown RBP18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 TRMT1Q9NXH9 659 aaKnown RBP18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 GPN3Q9UHW5 284 aaPredicted RBP18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 PLAAQ9Y263 795 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 DOPEY2Q9Y3R5 2298 aa18.51■□□□□ 0.55
SMARCB1-204ENST00000407422 CTAGE9A4FU28 777 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 A6NL46 340 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 CTSVO60911 334 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 CEACAM4O75871 244 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 ITGAXP20702 1163 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 ATP5DP30049 168 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 KLHL38Q2WGJ6 581 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 MRPL14Q6P1L8 145 aaKnown RBP18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 TTLL10Q6ZVT0 673 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 FDCSPQ8NFU4 85 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 OR2L3Q8NG85 312 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 OR2A1Q8NGT9 310 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 C17orf62Q9BQA9 187 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 INTS10Q9NVR2 710 aaKnown RBP18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 SNX12Q9UMY4 172 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 MED16Q9Y2X0 877 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 MRFAP1Q9Y605 127 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 MAD1L1Q9Y6D9 718 aa18.5■□□□□ 0.55
SMARCB1-204ENST00000407422 ARHGEF33A8MVX0 844 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 E5RI56 91 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 KIF5CO60282 957 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 USP1O94782 785 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 CLCN7P51798 805 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 THOC5Q13769 683 aaKnown RBP18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 CYP2A13Q16696 494 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 ZC3H12BQ5HYM0 836 aaKnown RBP18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 PAPD7Q5XG87 772 aaKnown RBP18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 ZNF549Q6P9A3 640 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 MED25Q71SY5 747 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 MRGPREQ86SM8 312 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms