RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PPLO60437 1756 aa4.53□□□□□ -1.69
HMGB3P18-201ENST00000406327 NKTRP30414 1462 aaKnown RBP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 WDR91A4D1P6 747 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 EIF3DO15371 548 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 RNASEH1O60930 286 aaKnown RBP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 KDM4BO94953 1096 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 CAMTA2O94983 1202 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 CRYABP02511 175 aaKnown RBP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 LINC00271P0C7V0 271 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 SPP1P10451 314 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 DAOP14920 347 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 EPCAMP16422 314 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 FBLP22087 321 aaKnown RBP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 AHRP35869 848 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 MAPK12P53778 367 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 TPD52P55327 224 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 MYBPHQ13203 477 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 GTF2H2Q13888 395 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 TAZQ16635 292 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 MDH1BQ5I0G3 518 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 ELFN2Q5R3F8 820 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 NDUFAF5Q5TEU4 345 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 TXNRD3NBQ6F5E7 133 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 GTF2H2CQ6P1K8 395 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 TMPRSS12Q86WS5 348 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 NUDT13Q86X67 352 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 KMT5CQ86Y97 462 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 DCP1BQ8IZD4 617 aaKnown RBP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 CLIP4Q8N3C7 705 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 RBMXL3Q8N7X1 1067 aaKnown RBP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 L3MBTL4Q8NA19 623 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 OR5M8Q8NGP6 311 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 OCC1Q8TAD7 63 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 NSMAFQ92636 917 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 ATP6V0A1Q93050 837 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 DHX58Q96C10 678 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 STAMBPL1Q96FJ0 436 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 PLEKHF1Q96S99 279 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 SEZ6LQ9BYH1 1024 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 UBTD1Q9HAC8 227 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 KLHL1Q9NR64 748 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 GKN1Q9NS71 199 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 DNAJC17Q9NVM6 304 aaKnown RBP4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 OSER1Q9NX31 292 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 SPHK1Q9NYA1 384 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 SEPT10Q9P0V9 454 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 TXNDC16Q9P2K2 825 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 C11orf21Q9P2W6 132 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 PCDHA7Q9UN72 937 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 SPATA31D1Q6ZQQ2 1576 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 METP08581 1390 aa4.52□□□□□ -1.69
HMGB3P18-201ENST00000406327 CD163L1Q9NR16 1453 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 ALKQ9UM73 1620 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 FEZF1A0PJY2 475 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 SDR42E2A6NKP2 422 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 FAM86B1E9PN63 330 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 HTATSF1O43719 755 aaKnown RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 WDR1O75083 606 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 RTN2O75298 545 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 CSN3P07498 182 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 FAM86B2P0C5J1 330 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 MYOD1P15172 320 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 GM2AP17900 193 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 CYP11B2P19099 503 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 IL15P40933 162 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 CASP3P42574 277 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 NR4A2P43354 598 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 MMP15P51511 669 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 PDX1P52945 283 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 C21orf58P58505 322 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 ST8SIA6P61647 398 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 PNRC1Q12796 327 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 TNK1Q13470 666 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 ITGA7Q13683 1181 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 KBTBD12Q3ZCT8 623 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 CCDC158Q5M9N0 1113 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 OR7E24Q6IFN5 339 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 PLBD1Q6P4A8 553 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 RHBDF2Q6PJF5 856 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 CENPQQ7L2Z9 268 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 LONP2Q86WA8 852 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 SFR1Q86XK3 245 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 PTOV1Q86YD1 416 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 FAM114A1Q8IWE2 563 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 MUC20Q8N307 709 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 CPSF7Q8N684 471 aaKnown RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 PHF21BQ96EK2 531 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 BSCL2Q96G97 398 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 SCMH1Q96GD3 660 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 OXNAD1Q96HP4 312 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 CABS1Q96KC9 395 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 SGK494Q96LW2 274 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 SPATA33Q96N06 139 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 MYADMQ96S97 322 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 PCYT2Q99447 389 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 ACAT2Q9BWD1 397 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 SLC5A7Q9GZV3 580 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 PNNQ9H307 717 aaKnown RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 MRPL44Q9H9J2 332 aaKnown RBP4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 MID1IP1Q9NPA3 183 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms