RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 OR52E6Q96RD3 313 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 KCNH6Q9H252 994 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 RC3H2Q9HBD1 1191 aaKnown RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 SIRT5Q9NXA8 310 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 PKD2L2Q9NZM6 624 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 TRPM5Q9NZQ8 1165 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 PCDHGA4Q9Y5G9 962 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 LOC100130705A0A1B0GUX0 176 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SERTM1A2A2V5 107 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 ULK1O75385 1050 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 FUCA1P04066 466 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 GSNP06396 782 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SGO1Q5FBB7 561 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 BROXQ5VW32 411 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 GCNT7Q6ZNI0 430 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 DNAJB7Q7Z6W7 309 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 ZDHHC13Q8IUH4 622 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SVOPLQ8N434 492 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 AADATQ8N5Z0 425 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 L3MBTL4Q8NA19 623 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 PLEKHA8Q96JA3 519 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 MCCC1Q96RQ3 725 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 P2RY13Q9BPV8 354 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SLC29A3Q9BZD2 475 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 DPY30Q9C005 99 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 WWOXQ9NZC7 414 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 PCDHGB1Q9Y5G3 927 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SZT2Q5T011 3432 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 GIPC1O14908 333 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SOCS5O75159 536 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SEC22BO75396 215 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SCELO95171 688 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 ITGAMP11215 1152 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 AMD1P17707 334 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SPAM1P38567 509 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 RPS14P62263 151 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 TUBA3CQ13748 450 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 UGT8Q16880 541 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 LRRC66Q68CR7 880 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 ADNP2Q6IQ32 1131 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SERPINA13PQ6UXR4 307 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 DCDC5Q6ZRR9 648 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 GAREM2Q75VX8 874 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 TMCO2Q7Z6W1 182 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 B3GNT8Q7Z7M8 397 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 TMC8Q8IU68 726 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 CROCCP3Q8IVE0 287 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 CLEC4FQ8N1N0 589 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 PGBD3Q8N328 593 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 CPA6Q8N4T0 437 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 HJURPQ8NCD3 748 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 YIPF2Q9BWQ6 316 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 UGT2B28Q9BY64 529 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 ENPP5Q9UJA9 477 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 BTBD3Q9Y2F9 522 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 UPK3BL1B0FP48 263 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 UPK3BL2E5RIL1 263 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 J3QRK9 145 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 M0QX08 132 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 BCAS1O75363 584 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 GCM2O75603 506 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 RYKP34925 604 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 PFN3P60673 137 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 CDK5R2Q13319 367 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 SF1Q15637 639 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 KDM4DQ6B0I6 523 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 CAPN13Q6MZZ7 669 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 SHQ1Q6PI26 577 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 SPESP1Q6UW49 350 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 PIWIL3Q7Z3Z3 882 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 BBS7Q8IWZ6 715 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 ZZZ3Q8IYH5 903 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 C8orf59Q8N0T1 100 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 OR5K1Q8NHB7 308 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 AUTS2Q8WXX7 1259 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 FBXL8Q96CD0 374 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 REXO5Q96IC2 774 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 RBM4BQ9BQ04 359 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 THUMPD3Q9BV44 507 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 RBM4Q9BWF3 364 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 THG1LQ9NWX6 298 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 EIF3LQ9Y262 564 aaKnown RBP9.58□□□□□ -0.88
MSH2-202ENST00000406134 CPQQ9Y646 472 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 U3KQV3 271 aa9.58□□□□□ -0.88
MSH2-202ENST00000406134 COL4A3Q01955 1670 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 SOBPA7XYQ1 873 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 GFYI3L273 518 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 PFDN6O15212 129 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 STK16O75716 305 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 SRCP12931 536 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 RAE1P78406 368 aaKnown RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 IFITM3Q01628 133 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 EMX1Q04741 257 aaPredicted RBP9.57□□□□□ -0.88
MSH2-202ENST00000406134 CPSF6Q16630 551 aaKnown RBP eCLIP9.57□□□□□ -0.88
MSH2-202ENST00000406134 MOGQ16653 247 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 APH1BQ8WW43 257 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 ASB11Q8WXH4 323 aa9.57□□□□□ -0.88
MSH2-202ENST00000406134 PYURFQ96I23 114 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms