RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ARHGAP24Q8N264 748 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 L3MBTL4Q8NA19 623 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 PSMA8Q8TAA3 256 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 TANKQ92844 425 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 SGF29Q96ES7 293 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 SEZ6LQ9BYH1 1024 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 OSBPL8Q9BZF1 889 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 VN1R1Q9GZP7 353 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 IL25Q9H293 177 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 ARRDC1-AS1Q9H2J1 176 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZNF701Q9NV72 531 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 DNAJC11Q9NVH1 559 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 COMMD8Q9NX08 183 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 SPG21Q9NZD8 308 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 GPR132Q9UNW8 380 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 SPIN1Q9Y657 262 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 TRIP12Q14669 1992 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 A0A0A6YYC8 382 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 A0A1W2PPW3 197 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 MED19A0JLT2 244 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 CASTOR2A6NHX0 329 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 I3L1I5 382 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 FLRT2O43155 660 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 TTI1O43156 1089 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRAF2O60831 178 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 LDB3O75112 727 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 B3GALNT1O75752 331 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 DDHD2O94830 711 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 LINC00271P0C7V0 271 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 FAM106CPP0CH98 169 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 SMIM18P0DKX4 95 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 C8orf89P0DMQ9 161 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 HAPLN1P10915 354 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 CSF2RAP15509 400 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 IL10P22301 178 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 TMPOP42166 694 aaKnown RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 RPL21P46778 160 aaKnown RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 PTGISQ16647 500 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 CTU2Q2VPK5 515 aaKnown RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 XKR9Q5GH70 373 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 GFRALQ6UXV0 394 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 ARHGAP22Q7Z5H3 698 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 PHLDB2Q86SQ0 1253 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 SLC9B2Q86UD5 537 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 EXOC3L1Q86VI1 746 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 PTOV1Q86YD1 416 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 APCDD1Q8J025 514 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 OTUD6BQ8N6M0 293 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 TRIML1Q8N9V2 468 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZNF114Q8NC26 417 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 PPFIBP2Q8ND30 876 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 NPEPL1Q8NDH3 523 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 NCOA7Q8NI08 942 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 FGFBP3Q8TAT2 258 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 LRRC8CQ8TDW0 803 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 RNF128Q8TEB7 428 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 FAM216AQ8WUB2 273 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 SLC20A1Q8WUM9 679 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 TMEM255BQ8WV15 326 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 FIG4Q92562 907 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 P2RX5Q93086 422 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 STAMBPL1Q96FJ0 436 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 SCMH1Q96GD3 660 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 C5orf30Q96GV9 206 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 C3orf30Q96M34 536 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 GAL3ST4Q96RP7 486 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 SLC2A11Q9BYW1 496 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 LSG1Q9H089 658 aaKnown RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 Q9H8V8 135 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRMT8Q9NR22 394 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 P4HTMQ9NXG6 502 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 FETUBQ9UGM5 382 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 FBXW2Q9UKT8 454 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 TEX264Q9Y6I9 313 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 PCDH11YQ9BZA8 1340 aa4.62□□□□□ -1.67
HMGB1P13-201ENST00000406019 TRAV24A0A0B4J272 114 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 A0A1B0GUV1 79 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 EME2A4GXA9 379 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 LINC01553A4QN01 128 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 MAGEA13PA6NCF6 341 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 CCDC69A6NI79 296 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 SLC9B1P1A6NJY1 282 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 KBTBD13C9JR72 458 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRPSAP2O60256 369 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 WDR1O75083 606 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 KDM4BO94953 1096 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 GSRP00390 522 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 C9P02748 559 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 ANKRD34CP0C6C1 535 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 EPORP19235 508 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 POLR2CP19387 275 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 CTNNB1P35222 781 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 PSMC4P43686 418 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 IER3P46695 156 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 FOLH1Q04609 750 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 DSC1Q08554 894 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 VEZF1Q14119 521 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms