RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 ZNF839A8K0R7 811 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 IFRD1O00458 451 aaPredicted RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 NARSO43776 548 aaKnown RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 BCKDHAP12694 445 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 TRIM25Q14258 630 aaKnown RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 CCDC85BQ15834 202 aaPredicted RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 FAM174BQ3ZCQ3 159 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 ZFAND4Q86XD8 727 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 FRMD1Q8N878 549 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 ZNF740Q8NDX6 193 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 FBXL8Q96CD0 374 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 APOLD1Q96LR9 279 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 PKP2Q99959 881 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 ELOVL6Q9H5J4 265 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 IKZF5Q9H5V7 419 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 PRM3Q9NNZ6 103 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 RAD18Q9NS91 495 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 MCM8Q9UJA3 840 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 TDRKHQ9Y2W6 561 aaKnown RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 NEUROG3Q9Y4Z2 214 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 MTCH2Q9Y6C9 303 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 V9GYQ6 96 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 SDK1Q7Z5N4 2213 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 WDR87Q6ZQQ6 2873 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 HEATR5BQ9P2D3 2071 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 PABPN1LA6NDY0 278 aaKnown RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 KPNA5O15131 536 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 SLC31A1O15431 190 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 RGS14O43566 566 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 AKAP10O43572 662 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 ENO2P09104 434 aaPredicted RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 CTHP32929 405 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 GNPDA1P46926 289 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 PPP2CBP62714 309 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 PPP2CAP67775 309 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 IRF8Q02556 426 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 DPTQ07507 201 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 TRIP10Q15642 601 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 ANKRD26P1Q6NSI1 321 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 LRRC70Q7Z2Q7 622 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 EFL1Q7Z2Z2 1120 aaKnown RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 TRIM46Q7Z4K8 759 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 DSG4Q86SJ6 1040 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 SPPL2CQ8IUH8 684 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 SYTL1Q8IYJ3 562 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 FLCNQ8NFG4 579 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 CDC26Q8NHZ8 85 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 GLMNQ92990 594 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 TMEM125Q96AQ2 219 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 NAF1Q96HR8 494 aaKnown RBP13.65□□□□□ -0.22
PRAME-205ENST00000405655 ZDHHC5Q9C0B5 715 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 ANGPTL2Q9UKU9 493 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 WDR37Q9Y2I8 494 aa13.65□□□□□ -0.22
PRAME-205ENST00000405655 C2CD4DB7Z1M9 353 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 SAP18O00422 153 aaKnown RBP13.64□□□□□ -0.23
PRAME-205ENST00000405655 DFNA5O60443 496 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 FKBP6O75344 327 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 GBAP04062 536 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 GSNP06396 782 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 CDKL1Q00532 357 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 ENPP2Q13822 863 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 NANOGP8Q6NSW7 305 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 DLEU7Q6UYE1 221 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 CHST15Q7LFX5 561 aaPredicted RBP13.64□□□□□ -0.23
PRAME-205ENST00000405655 FAM20CQ8IXL6 584 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 C10orf111Q8N326 155 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 CSGALNACT1Q8TDX6 532 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 AURKBQ96GD4 344 aaPredicted RBP13.64□□□□□ -0.23
PRAME-205ENST00000405655 COX14Q96I36 57 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 NANOGQ9H9S0 305 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 MOSPD1Q9UJG1 213 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 PPT2Q9UMR5 302 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 PCDHA9Q9Y5H5 950 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 MUC3AQ02505 3323 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 A0A1W2PQU0 124 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 FAM234BA2RU67 622 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 H0Y8X5 98 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 EIF3FO00303 357 aaPredicted RBP13.64□□□□□ -0.23
PRAME-205ENST00000405655 SLC16A5O15375 505 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 EEDO75530 441 aaKnown RBP13.64□□□□□ -0.23
PRAME-205ENST00000405655 MT-ND1P03886 318 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 PCNAP12004 261 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 GRIA3P42263 894 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 HNMTP50135 292 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 AQP4P55087 323 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 CLDN2P57739 230 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 TBPL1P62380 186 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 CDC16Q13042 620 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 SP140Q13342 867 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 BCL7AQ4VC05 210 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 USP39Q53GS9 565 aaKnown RBP13.64□□□□□ -0.23
PRAME-205ENST00000405655 NEK10Q6ZWH5 1172 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 TMPRSS11BQ86T26 416 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 PCYOX1LQ8NBM8 494 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 JPH3Q8WXH2 748 aaPredicted RBP13.64□□□□□ -0.23
PRAME-205ENST00000405655 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
PRAME-205ENST00000405655 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
PRAME-205ENST00000405655 MAGEB17A8MXT2 336 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms