RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 CCL22O00626 93 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 TXNDC9O14530 226 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 SEPT4O43236 478 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 PRAMEF11O60813 436 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 RNASEH2AO75792 299 aaKnown RBP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 ASGR1P07306 291 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 CD1DP15813 335 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 HDCP19113 662 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 GPX3P22352 226 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 HSPA13P48723 471 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 PLK1P53350 603 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 PER3P56645 1201 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 CDKL1Q00532 357 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 CREB5Q02930 508 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 LAMB3Q13751 1172 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 SEMA3AQ14563 771 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 ODF1Q14990 250 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 NFE2Q16621 373 aaPredicted RBP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 USP41Q3LFD5 358 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 MGAT5BQ3V5L5 792 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 CLLU1OSQ5K130 101 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 IRAK1BP1Q5VVH5 260 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 FAM219BQ5XKK7 198 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 RAP1GAP2Q684P5 730 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 NADSYN1Q6IA69 706 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 FAM45BPQ6NSW5 357 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 Q6ZRM9 215 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 HTR3DQ70Z44 454 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 PTAR1Q7Z6K3 402 aaPredicted RBP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 PIM3Q86V86 326 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 FUNDC1Q8IVP5 155 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 PCDH20Q8N6Y1 951 aaKnown RBP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 RNF148Q8N7C7 305 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 FAM156AQ8NDB6 213 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 FAM45AQ8TCE6 357 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 LPGAT1Q92604 370 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 SLCO4A1Q96BD0 722 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 PTERQ96BW5 349 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 ASB9Q96DX5 294 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 PHF21BQ96EK2 531 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 MYEOVQ96EZ4 313 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 BTN2A3PQ96KV6 586 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 UHRF1Q96T88 793 aaPredicted RBP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 CPPED1Q9BRF8 314 aaPredicted RBP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 Q9H521 79 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 ALG9Q9H6U8 611 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 POPDC3Q9HBV1 291 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 TRPC7Q9HCX4 862 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 MRPL40Q9NQ50 206 aaKnown RBP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 RGS18Q9NS28 235 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 ADA2Q9NZK5 511 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 HACD3Q9P035 362 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 TMEM181Q9P2C4 612 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 UXTQ9UBK9 157 aaPredicted RBP6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 GABRQQ9UN88 632 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 FIS1Q9Y3D6 152 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 AP4B1Q9Y6B7 739 aa6.66□□□□□ -1.34
CSNK2A1-204ENST00000400227 SMIM31A0A1B0GVY4 71 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 H0YJX3 145 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 MRASO14807 208 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 CD3EAPO15446 510 aaKnown RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 GPC4O75487 556 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 GJB3O75712 270 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 RPP40O75818 363 aaKnown RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 SRP72O76094 671 aaKnown RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 TBX18O95935 607 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 GOT2P00505 430 aaKnown RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 EPOP01588 193 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 FGF1P05230 155 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 FGF4P08620 206 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 ALDOCP09972 364 aaKnown RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 ZNF26P17031 533 aaPredicted RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 HOXB8P17481 243 aaPredicted RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 HLA-DPA1P20036 260 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 OGNP20774 298 aaKnown RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 PSMA3P25788 255 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 YWHAQP27348 245 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 CST5P28325 142 aaPredicted RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 ACVRL1P37023 503 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 PBX3P40426 434 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 SLC6A9P48067 706 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 ACADVLP49748 655 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 FLT3LGP49771 235 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 NEK2P51955 445 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 SLC16A1P53985 500 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 POLE2P56282 527 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 YBEYP58557 167 aaPredicted RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 HERVK_113P63132 956 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 MYBPC1Q00872 1141 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 CRHR2Q13324 411 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 BTG3Q14201 252 aaPredicted RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 PTPRCAPQ14761 206 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 POLD3Q15054 466 aaPredicted RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 OR4D1Q15615 310 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 PARP15Q460N3 678 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 C5orf22Q49AR2 442 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 SAMD4BQ5PRF9 694 aaKnown RBP6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 IL23RQ5VWK5 629 aa6.65□□□□□ -1.35
CSNK2A1-204ENST00000400227 C1QL3Q5VWW1 255 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms