RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SLC22A18Q96BI1 424 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TCTN2Q96GX1 697 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PKP4Q99569 1192 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ACAT2Q9BWD1 397 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 GPN2Q9H9Y4 310 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FANCEQ9HB96 536 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 IL17BQ9UHF5 180 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ADAMTS6Q9UKP5 1117 aa13.58□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CXorf49A8MYA2 514 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MYO1CO00159 1063 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SLC16A8O95907 504 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SYF2O95926 243 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TUBB4AP04350 444 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MSL3P1P0C860 447 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MPC1LP0DKB6 136 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CBSLP0DN79 551 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SAT1P21673 171 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CBSP35520 551 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 GRIA3P42263 894 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SKIV2L2P42285 1042 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 GABRA4P48169 554 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 GPX6P59796 221 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CAV1Q03135 178 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CYP2A13Q16696 494 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 C3orf62Q6ZUJ4 267 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 UBE2R2Q712K3 238 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZC3HC1Q86WB0 502 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MMGT1Q8N4V1 131 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 RAB42Q8N4Z0 105 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PPFIBP2Q8ND30 876 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 OR2A1Q8NGT9 310 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 OR8K5Q8NH50 307 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 KIF18AQ8NI77 898 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 HMGCLL1Q8TB92 370 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 BBC3Q96PG8 261 aaPredicted RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FCRL4Q96PJ5 515 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MIPEPQ99797 713 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 DMGDHQ9UI17 866 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 VWA7Q9Y334 891 aa13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MRPS18BQ9Y676 258 aaKnown RBP13.57□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TCRBV9S1A1TA0A576 114 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZBTB14O43829 449 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 NRP2O60462 931 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ERGP11308 486 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FDXRP22570 491 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 OAS2P29728 719 aaKnown RBP13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 DLSTP36957 453 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 GPS2Q13227 327 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TSTA3Q13630 321 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MAP7Q14244 749 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FCRL6Q6DN72 434 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FAM45BPQ6NSW5 357 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FAM45AQ8TCE6 357 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZNF480Q8WV37 535 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SEC14L1Q92503 715 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 N4BP2L2Q92802 583 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 KIAA1143Q96AT1 154 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 LINGO1Q96FE5 620 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SPRTNQ9H040 489 aaPredicted RBP13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SYTL2Q9HCH5 934 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 LHX9Q9NQ69 397 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZDHHC18Q9NUE0 388 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SPATA7Q9P0W8 599 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SERTAD3Q9UJW9 196 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CROTQ9UKG9 612 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PADI1Q9ULC6 663 aa13.56□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CTAGE15A4D2H0 777 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 H3BMH7 237 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 EIF3FO00303 357 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CPNE3O75131 537 aaKnown RBP13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TSPAN12O95859 305 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 C1QAP02745 245 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CCNYL3P0C7X3 344 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CTAGE8P0CG41 777 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TCN2P20062 427 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CYP2A7P20853 494 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MAGEA4P43358 317 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 RGS4P49798 205 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PNLIPRP1P54315 467 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ITGA1P56199 1179 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZNF460Q14592 562 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 LCN10Q6JVE6 187 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FIGLAQ6QHK4 219 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TMEM207Q6UWW9 146 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MBOAT1Q6ZNC8 495 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CTAGE6Q86UF2 777 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SLC26A11Q86WA9 606 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CTAGE4Q8IX94 777 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 DNAJC22Q8N4W6 341 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZSCAN1Q8NBB4 408 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FBXO15Q8NCQ5 510 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MNS1Q8NEH6 495 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 OR2L3Q8NG85 312 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 RUFY1Q96T51 708 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MCMBPQ9BTE3 642 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SLC12A9Q9BXP2 914 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms