RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ZNF789Q5FWF6 425 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 CTSL3PQ5NE16 218 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 TAS2R42Q7RTR8 314 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PATL1Q86TB9 770 aaKnown RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 CFAP52Q8N1V2 620 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 OR4K1Q8NGD4 311 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 GTF2H4Q92759 462 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PSD2Q9BQI7 771 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 VPS29Q9UBQ0 182 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ATP6V1HQ9UI12 483 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ANAPC2Q9UJX6 822 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PCDHGB1Q9Y5G3 927 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PCDHA9Q9Y5H5 950 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 DRD2P14416 443 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ARL1P40616 181 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 CHRNA6Q15825 494 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 FAM98BQ52LJ0 330 aaKnown RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PDZD3Q86UT5 571 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ALYREFQ86V81 257 aaKnown RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM132CQ8N3T6 1108 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 TAB3Q8N5C8 712 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 AURKBQ96GD4 344 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 CCNL2Q96S94 520 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 SPATA16Q9BXB7 569 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PCDH12Q9NPG4 1184 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PCDHGA7Q9Y5G6 932 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 COMMD3-BMI1R4GMX3 469 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 A3GALT2U3KPV4 340 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 TDRD6O60522 2096 aaKnown RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 M0R3G1 203 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ASNA1O43681 348 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 MT-CO1P00395 513 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ITGA2P17301 1181 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PTSQ03393 145 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 KCNC4Q03721 635 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ATP6AP1Q15904 470 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 DEPDC1Q5TB30 811 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 GPR153Q6NV75 609 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 TRIM40Q6P9F5 258 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 LRRTM4Q86VH4 590 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 KIAA2013Q8IYS2 634 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 KIF2BQ8N4N8 673 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 OR2L2Q8NH16 312 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ADAMTS18Q8TE60 1221 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ASPSCR1Q9BZE9 553 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 MYNNQ9NPC7 610 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PCDHGB4Q9UN71 923 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 DTNAQ9Y4J8 743 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 APBB3O95704 486 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 APODP05090 189 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CDH1P12830 882 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 HPCAL1P37235 193 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 GLRBP48167 497 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 GSK3BP49841 420 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 HEPACAMQ14CZ8 416 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 RETREG3Q86VR2 466 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 IQCHQ86VS3 1027 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CALHM3Q86XJ0 350 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 EGFL8Q99944 293 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ECSITQ9BQ95 431 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 DPH2Q9BQC3 489 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TEX101Q9BY14 249 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 DPY30Q9C005 99 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 EVLQ9UI08 416 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 PSME2Q9UL46 239 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 MUC22E2RYF6 1773 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 LATO43561 262 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 PDE9AO76083 593 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 BMP10O95393 424 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CHRM1P11229 460 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CCR5P51681 352 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CYP20A1Q6UW02 462 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TRIM69Q86WT6 500 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 RIMKLAQ8IXN7 391 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 CXorf40AQ8TE69 158 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 EPS8L2Q9H6S3 715 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 UCK1Q9HA47 277 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 MS4A12Q9NXJ0 267 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 SLCO3A1Q9UIG8 710 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 PDE10AQ9Y233 779 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 MAN2B1O00754 1011 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ADAMDEC1O15204 470 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 KAT7O95251 611 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 S100A3P33764 101 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 IRF9Q00978 393 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 RUNX3Q13761 415 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ATP13A5Q4VNC0 1218 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 SLC9B1Q4ZJI4 515 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ACVR1CQ8NER5 493 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 OR2T12Q8NG77 320 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 VPS50Q96JG6 964 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 POLR2J2Q9GZM3 115 aaKnown RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 POLR2J3Q9H1A7 115 aaKnown RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 SNX7Q9UNH6 387 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ARL5AQ9Y689 179 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF318Q5VUA4 2279 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 MANBAO00462 879 aa5.7□□□□□ -1.5
PTPRD-206ENST00000397617 RNASET2O00584 256 aaKnown RBP5.7□□□□□ -1.5
PTPRD-206ENST00000397617 TXNDC9O14530 226 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms