RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PSMB5P28074 263 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 TNFRSF8P28908 595 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 OAS2P29728 719 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 PMS2P54278 862 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 PNLIPRP1P54315 467 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ACY1Q03154 408 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ARHGAP19Q14CB8 494 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ZKSCAN8Q15776 578 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 PHKG1Q16816 387 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 TRMT10CQ7L0Y3 403 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 SYTL1Q8IYJ3 562 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 MCOLN3Q8TDD5 553 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ZNF480Q8WV37 535 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 PDLIM5Q96HC4 596 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 DCBLD2Q96PD2 775 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 TEFMQ96QE5 360 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 PDE7BQ9NP56 450 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 IKZF3Q9UKT9 509 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ACSL6Q9UKU0 697 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ANKRD12Q6UB98 2062 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 A0A087WUV0 522 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 A0A1W2PPV9 198 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ZNF839A8K0R7 811 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 WISP3O95389 354 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 HSD17B2P37059 387 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 RAB10P61026 200 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 TSTA3Q13630 321 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 BMPR2Q13873 1038 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 SF1Q15637 639 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 CYB5D1Q6P9G0 228 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 SUSD1Q6UWL2 747 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 MBOAT1Q6ZNC8 495 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 CMC1Q7Z7K0 106 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 PPFIBP2Q8ND30 876 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ZNF248Q8NDW4 579 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 SMPDL3AQ92484 453 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 NAF1Q96HR8 494 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 ZPBPQ9BS86 351 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 FGF21Q9NSA1 209 aa20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-206ENST00000397408 SDK2Q58EX2 2172 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 PABPN1LA6NDY0 278 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 NPEPPSL1A6NEC2 478 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 MAP3K7O43318 606 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 PRICKLE3O43900 615 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 MAGP20916 626 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 IMPA1P29218 277 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 EIF2S3P41091 472 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 IL11RAQ14626 422 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 GPR19Q15760 415 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 ZIC1Q15915 447 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 ZFAND4Q86XD8 727 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 PPP1R3BQ86XI6 285 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 SLC44A1Q8WWI5 657 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 PAFAH2Q99487 392 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 MIPEPQ99797 713 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 TXLNGYQ9BZA5 131 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 STOX2Q9P2F5 926 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 RARRES3Q9UL19 164 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 KLHL20Q9Y2M5 609 aa20.43■□□□□ 0.86
TSPAN4-206ENST00000397408 CDC7O00311 574 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 RIPK2O43353 540 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 INHBAP08476 426 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 ABHD2P08910 425 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 HIST1H2AGP0C0S8 130 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 FGF5P12034 268 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 HIST1H2ADP20671 130 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 CD82P27701 267 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 RPA3P35244 121 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 TUBB4BP68371 445 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 MROH9Q5TGP6 573 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 RAPH1Q70E73 1250 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 KCNE4Q8WWG9 221 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 RNF31Q96EP0 1072 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 TCTN2Q96GX1 697 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 HIST1H2AHQ96KK5 128 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 CCDC138Q96M89 665 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 HIST1H2AJQ99878 128 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 H2AFJQ9BTM1 129 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 ACAT2Q9BWD1 397 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 UNKQ9C0B0 810 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 IKBKGQ9Y6K9 419 aa20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 V9GYY5 206 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-206ENST00000397408 SRRM3A6NNA2 597 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 E7ENX8 843 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 POC1B-GALNT4F8VUJ3 575 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 STMND1H3BQB6 276 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 RRP8O43159 456 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 CCDC166P0CW27 439 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 TAP2Q03519 686 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 KIAA1614Q5VZ46 1190 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 SBSNQ6UWP8 590 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 CDHR3Q6ZTQ4 885 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 SPATA6LQ8N4H0 392 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 OR2L3Q8NG85 312 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 OR2A1Q8NGT9 310 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 ANKRD7Q92527 254 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 TRIM54Q9BYV2 358 aa20.41■□□□□ 0.86
TSPAN4-206ENST00000397408 DERL2Q9GZP9 239 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms