RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 MRPS33Q9Y291 106 aaKnown RBP16.84■□□□□ 0.29
SIN3A-203ENST00000394949 ABHD14A-ACY1A0A1B0GW23 586 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 SOWAHBA6NEL2 793 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 BOLA2-SMG1P6H3BVE0 249 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 SEPT4O43236 478 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 GSTM3P21266 225 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 EMX2Q04743 252 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 ZNF613Q6PF04 617 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 KLHL24Q6TFL4 600 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 TTLL2Q9BWV7 592 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 DPAGT1Q9H3H5 408 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 ZNF214Q9UL59 606 aaPredicted RBP16.84■□□□□ 0.29
SIN3A-203ENST00000394949 METTL21EPA6NDL7 271 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 PAPSS2O95340 614 aaPredicted RBP16.84■□□□□ 0.29
SIN3A-203ENST00000394949 HMGN1P05114 100 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 OR4Q2P0C623 313 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 IFI30P13284 250 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 GABARAPL2P60520 117 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 CSTF1Q05048 431 aaKnown RBP16.84■□□□□ 0.29
SIN3A-203ENST00000394949 SCARB2Q14108 478 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 SEMA3AQ14563 771 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 TSTQ16762 297 aaKnown RBP16.84■□□□□ 0.29
SIN3A-203ENST00000394949 CTC1Q2NKJ3 1217 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 TMIEQ8NEW7 156 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 CEP295NLQ96MC4 621 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 MAP10Q9P2G4 905 aa16.84■□□□□ 0.29
SIN3A-203ENST00000394949 SCRN3Q0VDG4 424 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 ADAM15Q13444 863 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 MADCAM1Q13477 382 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 RABL3Q5HYI8 236 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 STX12Q86Y82 276 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 PQLC3Q8N755 202 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 ZNF384Q8TF68 577 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 CLEC4CQ8WTT0 213 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 KCNC2Q96PR1 638 aa16.83■□□□□ 0.29
SIN3A-203ENST00000394949 SLC25A12O75746 678 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 ZNF280AP59817 542 aaPredicted RBP16.83■□□□□ 0.28
SIN3A-203ENST00000394949 UFM1P61960 85 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 EIF5AP63241 154 aaKnown RBP16.83■□□□□ 0.28
SIN3A-203ENST00000394949 FUT10Q6P4F1 479 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 FAM171BQ6P995 826 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 TMC8Q8IU68 726 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 KCTD13Q8WZ19 329 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 BCL7BQ9BQE9 202 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 ABCG2Q9UNQ0 655 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 SDHDO14521 159 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 CDK14O94921 469 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 ITGB1P05556 798 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 NFKB2Q00653 900 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 CEACAM7Q14002 265 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 SEZ6LQ9BYH1 1024 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 DERL2Q9GZP9 239 aa16.83■□□□□ 0.28
SIN3A-203ENST00000394949 STOX2Q9P2F5 926 aaPredicted RBP16.83■□□□□ 0.28
SIN3A-203ENST00000394949 IRAK2O43187 625 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 ENTPD6O75354 484 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 IVDP26440 423 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 ERP29P30040 261 aaKnown RBP16.82■□□□□ 0.28
SIN3A-203ENST00000394949 MSANTD2Q6P1R3 559 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 KBTBD6Q86V97 674 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 SLAIN1Q8ND83 568 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 ZFP3Q96NJ6 502 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 USP29Q9HBJ7 922 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 ZDHHC7Q9NXF8 308 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 PCDHGC4Q9Y5F7 938 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 N6AMT1Q9Y5N5 214 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 SNX10Q9Y5X0 201 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 AFDNP55196 1824 aaKnown RBP16.82■□□□□ 0.28
SIN3A-203ENST00000394949 NEDD8-MDP1E9PL57 170 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 SNNO75324 88 aaPredicted RBP16.82■□□□□ 0.28
SIN3A-203ENST00000394949 CHRNA1P02708 482 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 HLA-DPB1P04440 258 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 HLA-DQB2P05538 268 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 ENGP17813 658 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 HTR1EP28566 365 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 CLK3P49761 638 aaKnown RBP16.82■□□□□ 0.28
SIN3A-203ENST00000394949 PRR5P85299 388 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 RANBP3LQ86VV4 465 aaPredicted RBP16.82■□□□□ 0.28
SIN3A-203ENST00000394949 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.82■□□□□ 0.28
SIN3A-203ENST00000394949 SCML4Q8N228 414 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 LRRC15Q8TF66 581 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 PRICKLE1Q96MT3 831 aaPredicted RBP16.82■□□□□ 0.28
SIN3A-203ENST00000394949 POPDC3Q9HBV1 291 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 A0A0G2JPF8 293 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 LRRC14BA6NHZ5 514 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 HNRNPCL3B7ZW38 293 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 NFATC1O95644 943 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 TFPTP0C1Z6 253 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 HNRNPCL4P0DMR1 293 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 STOMP27105 288 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 STT3AP46977 705 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 RAPSNQ13702 412 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 DUOXA1Q1HG43 343 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 ANKRD13BQ86YJ7 626 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 SLC37A3Q8NCC5 494 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 KIAA1191Q96A73 305 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 IKZF2Q9UKS7 526 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 CMAHPQ9Y471 501 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 PCDHGB1Q9Y5G3 927 aa16.82■□□□□ 0.28
SIN3A-203ENST00000394949 ZNF541Q9H0D2 1346 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms