RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SERPINB12Q96P63 405 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 OSBPL9Q96SU4 736 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 WDR83Q9BRX9 315 aaKnown RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ING2Q9H160 280 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 SYTL2Q9HCH5 934 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ENAMQ9NRM1 1142 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 EURLQ9NYK6 297 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 STOX2Q9P2F5 926 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 SERTAD3Q9UJW9 196 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 CRYL1Q9Y2S2 319 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 JRKLQ9Y4A0 524 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 NBASA2RRP1 2371 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 LOC105369274A0A096LPK9 316 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 IGKV1-8A0A0C4DH67 115 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 LOC102723532A0A0G2JNH3 316 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 FAM237BA0A1B0GVD1 139 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 TTLL8A6PVC2 850 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 TP73O15350 636 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 KIF5CO60282 957 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 OR2B3O76000 313 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 ONECUT2O95948 504 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 APOA4P06727 396 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 KLK3P07288 261 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-205ENST00000394892 ERGP11308 486 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 GABRB3P28472 473 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 CD97P48960 835 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 CCL11P51671 97 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 PGGT1BP53609 377 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 MLLT10P55197 1068 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 ADARP55265 1226 aaKnown RBP8.5□□□□□ -1.05
ATG4A-205ENST00000394892 CTBP1Q13363 440 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 SLC9A5Q14940 896 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 CYP2A13Q16696 494 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 RNASEH2BQ5TBB1 312 aaKnown RBP8.5□□□□□ -1.05
ATG4A-205ENST00000394892 FRMPD2BQ6IN97 320 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 NEPROQ6NW34 567 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 FBXO42Q6P3S6 717 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 CNSTQ6PJW8 725 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 CCDC137Q6PK04 289 aaKnown RBP8.5□□□□□ -1.05
ATG4A-205ENST00000394892 PPP1R32Q7Z5V6 425 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 LRRC6Q86X45 466 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 LRRC56Q8IYG6 542 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-205ENST00000394892 OR4N4Q8N0Y3 316 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 OR2A1Q8NGT9 310 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 HMGCLL1Q8TB92 370 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 ACTRT1Q8TDG2 376 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 THAP4Q8WY91 577 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 DLG3Q92796 817 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 PBKQ96KB5 322 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 PWWP2AQ96N64 755 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 COL12A1Q99715 3063 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 NUDT9Q9BW91 350 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 SLC6A20Q9NP91 592 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 FBXO6Q9NRD1 293 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-205ENST00000394892 HOMER3Q9NSC5 361 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 TRMT1Q9NXH9 659 aaKnown RBP8.5□□□□□ -1.05
ATG4A-205ENST00000394892 PLEKHB1Q9UF11 243 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-205ENST00000394892 GNPTGQ9UJJ9 305 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 PLCL2Q9UPR0 1127 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 KLK4Q9Y5K2 254 aa8.5□□□□□ -1.05
ATG4A-205ENST00000394892 SDR42E2A6NKP2 422 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 PGRMC1O00264 195 aaKnown RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 ZSCAN9O15535 394 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 PHF2O75151 1096 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 PSIP1O75475 530 aaKnown RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 HAUS5O94927 633 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 ESR1P03372 595 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 MLNP12872 115 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 PKMP14618 531 aaKnown RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 OGNP20774 298 aaKnown RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 SLC1A2P43004 574 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 MPP1Q00013 466 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 ZXDCQ2QGD7 858 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 NADK2Q4G0N4 442 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 NKAIN1Q4KMZ8 207 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 PRR30Q53SZ7 412 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 MLIPQ5VWP3 458 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 MRNIPQ6NTE8 343 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 OTOAQ7RTW8 1153 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 MRGPREQ86SM8 312 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 ARHGEF39Q8N4T4 335 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 Q8NA96 180 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 GALNT11Q8NCW6 608 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 FDCSPQ8NFU4 85 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 OR2L3Q8NG85 312 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 SEC14L1Q92503 715 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 ZNF669Q96BR6 464 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 TCF12Q99081 682 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 PKP4Q99569 1192 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 TTC1Q99614 292 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 MIPEPQ99797 713 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 DDX47Q9H0S4 455 aaKnown RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 GRPEL1Q9HAV7 217 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 FANCEQ9HB96 536 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 SLC17A6Q9P2U8 582 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 ANAPC5Q9UJX4 755 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 SNX12Q9UMY4 172 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 SNX7Q9UNH6 387 aa8.49□□□□□ -1.05
ATG4A-205ENST00000394892 PCDHGA9Q9Y5G4 932 aaKnown RBP8.49□□□□□ -1.05
ATG4A-205ENST00000394892 DOPEY2Q9Y3R5 2298 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms