RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TUBA1CQ9BQE3 449 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 CCNB1IP1Q9NPC3 277 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 WDR70Q9NW82 654 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 MAP4K5Q9Y4K4 846 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 GPC6Q9Y625 555 aaPredicted RBP15.74■□□□□ 0.11
PCDH1-203ENST00000394536 SEPT4O43236 478 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 EPORP19235 508 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 RRM2P31350 389 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 HNF4AP41235 474 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 BEND5Q7L4P6 421 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 TTC30BQ8N4P2 665 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 PSD4Q8NDX1 1056 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 CHDHQ8NE62 594 aaPredicted RBP15.74■□□□□ 0.11
PCDH1-203ENST00000394536 GPR150Q8NGU9 434 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 ZFP90Q8TF47 636 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 SGK2Q9HBY8 427 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 PRDM8Q9NQV8 689 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 SLC22A1O15245 554 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 COCHO43405 550 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 VIPP01282 170 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 DCKP27707 260 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 GSTM2P28161 218 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 ZXDBP98169 803 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 MTA1Q13330 715 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 TXNDC8Q6A555 127 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 NIPAL1Q6NVV3 410 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 HJURPQ8NCD3 748 aaPredicted RBP15.74■□□□□ 0.11
PCDH1-203ENST00000394536 MYDGFQ969H8 173 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 BTBD3Q9Y2F9 522 aa15.74■□□□□ 0.11
PCDH1-203ENST00000394536 MYO10Q9HD67 2058 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 PDYNP01213 254 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 OR1E2P47887 323 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 PSMD8P48556 350 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 ZNF140P52738 457 aaPredicted RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 SF1Q15637 639 aaKnown RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 PYCR3Q53H96 274 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 CYHR1Q6ZMK1 362 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 RBM12BQ8IXT5 1001 aaKnown RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 SCML4Q8N228 414 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 RNF175Q8N4F7 328 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 NDNFQ8TB73 568 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 UHRF1Q96T88 793 aaPredicted RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 CORINQ9Y5Q5 1042 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 CPQQ9Y646 472 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 ALDH1A1P00352 501 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 FUCA1P04066 466 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 PRPS2P11908 318 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 PFKLP17858 780 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 GPR17Q13304 367 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 HIST2H2ACQ16777 129 aaPredicted RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 RTP2Q5QGT7 225 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 HIST2H2AA3Q6FI13 130 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 NADSYN1Q6IA69 706 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 Q6ZNX1 250 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 NCCRP1Q6ZVX7 275 aaPredicted RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 CACUL1Q86Y37 369 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 GATAD2AQ86YP4 633 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 UBE2J2Q8N2K1 259 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 SLC22A17Q8WUG5 538 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 LGALS12Q96DT0 336 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 HSH2DQ96JZ2 352 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 ZNF641Q96N77 438 aaPredicted RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 KCNS3Q9BQ31 491 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 KRT87PA6NCN2 255 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 ACOX3O15254 700 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 LCKP06239 509 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 HOXC13P31276 330 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 SLC11A1P49279 550 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 RPS3AP61247 264 aaKnown RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 SNRPD1P62314 119 aaKnown RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 USP41Q3LFD5 358 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 DCP2Q8IU60 420 aaKnown RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 OR4A15Q8NGL6 344 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 GTF2H4Q92759 462 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 SLC32A1Q9H598 525 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 THUMPD1Q9NXG2 353 aaKnown RBP15.73■□□□□ 0.11
PCDH1-203ENST00000394536 TRPC4Q9UBN4 977 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 VPS51Q9UID3 782 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 ERGIC3Q9Y282 383 aa15.73■□□□□ 0.11
PCDH1-203ENST00000394536 WASH4PA8MWX3 477 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 ZNF701M0R085 212 aaPredicted RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 EOMESO95936 686 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 CATP04040 527 aaKnown RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 GJA1P17302 382 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 FSHRP23945 695 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 HTR1BP28222 390 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 EMP3P54852 163 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 PRKCZQ05513 592 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 ABHD18Q0P651 414 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 CRHR2Q13324 411 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 NFATC2Q13469 925 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 TIGD6Q17RP2 521 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 HKDC1Q2TB90 917 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 CTSL3PQ5NE16 218 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 TMPRSS11BQ86T26 416 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 RPL3LQ92901 407 aaKnown RBP15.72■□□□□ 0.11
PCDH1-203ENST00000394536 MGME1Q9BQP7 344 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 OAZ2O95190 189 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 IGLV3-25P01717 112 aa15.72■□□□□ 0.11
PCDH1-203ENST00000394536 PIM1P11309 404 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms