RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 EFNA1P20827 205 aaPredicted RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 RPIAP49247 311 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 TUFMP49411 452 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 OCA2Q04671 838 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 LAIR1Q6GTX8 287 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 HIPK1Q86Z02 1210 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 CHPFQ8IZ52 775 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 C2orf15Q8WU43 125 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 FAR1Q8WVX9 515 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 APIPQ96GX9 242 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 SH3YL1Q96HL8 342 aaPredicted RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 RETREG1Q9H6L5 497 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 PCDH12Q9NPG4 1184 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 A0A096LPI6 279 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 ANXA5P08758 320 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 ITIH1P19827 911 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 SMN1Q16637 294 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 TRIM16LQ309B1 348 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 CPZQ66K79 652 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 ZCCHC8Q6NZY4 707 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 RFLNAQ6ZTI6 216 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 NDNFQ8TB73 568 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 GLMNQ92990 594 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 DAPK2Q9UIK4 370 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 VPS4AQ9UN37 437 aa13.59□□□□□ -0.23
GAPVD1-205ENST00000394084 RFXANKO14593 260 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 PORP16435 677 aaPredicted RBP13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 CLDN8P56748 225 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 HSPA14Q0VDF9 509 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 ELAVL2Q12926 359 aaKnown RBP13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 NPTX1Q15818 432 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 VTCN1Q7Z7D3 282 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 B3GNT8Q7Z7M8 397 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 ZSWIM9Q86XI8 627 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 GPR26Q8NDV2 337 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 OR7A2PQ8NGA2 310 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 RORBQ92753 470 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 MAGIXQ9H6Y5 334 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 RMND5AQ9H871 391 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 ZBBXA8MT70 800 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 SDC1P18827 310 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 CDH3P22223 829 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 ITPKAP23677 461 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 PSMB9P28065 219 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 VBP1P61758 197 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 AP1S1P61966 158 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 TCTN1Q2MV58 587 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 ZXDCQ2QGD7 858 aaPredicted RBP13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 KIAA1841Q6NSI8 718 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 PLPP6Q8IY26 295 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 NXPE1Q8N323 547 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 ZBTB8BQ8NAP8 495 aaPredicted RBP13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 PIK3C3Q8NEB9 887 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 TET1Q8NFU7 2136 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 ZFP90Q8TF47 636 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 PRM3Q9NNZ6 103 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 PALMDQ9NP74 551 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 NMRK2Q9NPI5 230 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 MTRRQ9UBK8 725 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 FAM8A1Q9UBU6 413 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 MBD1Q9UIS9 605 aaPredicted RBP13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 OR51B4Q9Y5P0 310 aa13.58□□□□□ -0.24
GAPVD1-205ENST00000394084 CLDN25C9JDP6 229 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 SLC16A6O15403 523 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 FADS2O95864 444 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 EPHA2P29317 976 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 PTPN6P29350 595 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 SPAM1P38567 509 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 CLK3P49761 638 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 DAPP51397 102 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 TTLL9Q3SXZ7 439 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 LRRC73Q5JTD7 316 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 LRIF1Q5T3J3 769 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 TMEM236Q5W0B7 351 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 UBE2R2Q712K3 238 aaPredicted RBP13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 ANKRD13BQ86YJ7 626 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 UBTD2Q8WUN7 234 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 ZNF347Q96SE7 839 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 TRIT1Q9H3H1 467 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 RASSF1Q9NS23 344 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 INTS6Q9UL03 887 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 TMEM247A6NEH6 219 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 M0R3G1 203 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 UGT2B11O75310 529 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 FPGSQ05932 587 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 CD300CQ08708 224 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 ADPRMQ3LIE5 342 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 SHQ1Q6PI26 577 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 MACC1Q6ZN28 852 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 SAPCD2Q86UD0 394 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 OR52E4Q8NGH9 312 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 UBE2FQ969M7 185 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 REXO5Q96IC2 774 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 DPH2Q9BQC3 489 aaPredicted RBP13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 ALOXE3Q9BYJ1 711 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 SLC32A1Q9H598 525 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 RNF186Q9NXI6 227 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 CLEC4EQ9ULY5 219 aa13.57□□□□□ -0.24
GAPVD1-205ENST00000394084 GMPPBQ9Y5P6 360 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms