RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ACTR5Q9H9F9 607 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-203ENST00000391855 PLAC1Q9HBJ0 212 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 GALPQ9UBC7 116 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 CROTQ9UKG9 612 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 SRPK3Q9UPE1 567 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 PLCL2Q9UPR0 1127 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 RUVBL2Q9Y230 463 aaKnown RBP12.21□□□□□ -0.45
GGPS1-203ENST00000391855 PCDHGA6Q9Y5G7 932 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 TARM1B6A8C7 271 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ZBTB14O43829 449 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 PRICKLE3O43900 615 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 URI1O94763 535 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CCNDBP1O95273 360 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 AHSGP02765 367 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 NTRK1P04629 796 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 C8GP07360 202 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 MAGP20916 626 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 GABRB3P28472 473 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 GABRA4P48169 554 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CDC20Q12834 499 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CUL1Q13616 776 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 SF1Q15637 639 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CCSMST1Q4G0I0 132 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ZC3H12BQ5HYM0 836 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 HP1BP3Q5SSJ5 553 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 KIAA1614Q5VZ46 1190 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 C8orf74Q6P047 294 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 TLDC1Q6P9B6 456 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ANKMY2Q8IV38 441 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 MYO1HQ8N1T3 1032 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 DENND1AQ8TEH3 1009 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 PYROXD1Q8WU10 500 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ASB11Q8WXH4 323 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CDKL2Q92772 493 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ZUFSPQ96AP4 578 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 NDNQ99608 321 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 SLC30A3Q99726 388 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 C17orf62Q9BQA9 187 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 GPR87Q9BY21 358 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 KLHL25Q9H0H3 589 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 GRHL1Q9NZI5 618 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ANKMY1Q9P2S6 941 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 RALYQ9UKM9 306 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 KLK4Q9Y5K2 254 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 GFYI3L273 518 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 MEN1O00255 615 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 TERTO14746 1132 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 SLC16A5O15375 505 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 OR2B3O76000 313 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 GSTA2P09210 222 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 SFTPCP11686 197 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 TCN2P20062 427 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CMPK1P30085 196 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 GPS2Q13227 327 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 FASTKD3Q14CZ7 662 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ZIC1Q15915 447 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 YOD1Q5VVQ6 348 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 TRMT10BQ6PF06 316 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ZNF517Q6ZMY9 492 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 PALM2Q8IXS6 379 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 DSELQ8IZU8 1212 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 DNAJC22Q8N4W6 341 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 MNS1Q8NEH6 495 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 PROKR1Q8TCW9 393 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CT55Q8WUE5 264 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 MR1Q95460 341 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 TRIM44Q96DX7 344 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CLIP3Q96DZ5 547 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 ARHGAP9Q9BRR9 750 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 FAM60AQ9NP50 221 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 UTP6Q9NYH9 597 aaKnown RBP12.2□□□□□ -0.46
GGPS1-203ENST00000391855 MOCS1Q9NZB8 636 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 CIDEBQ9UHD4 219 aa12.2□□□□□ -0.46
GGPS1-203ENST00000391855 PABPN1LA6NDY0 278 aaKnown RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 ZSCAN9O15535 394 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 F7P08709 466 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 RAB40ALP0C0E4 278 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 AGXTP21549 392 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 FDXRP22570 491 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 MCM3P25205 808 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 RPA3P35244 121 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 RORAP35398 523 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 PNLIPRP1P54315 467 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 RPS15P62841 145 aaKnown RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 ABATP80404 500 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 MRPS25P82663 173 aaKnown RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 DEFB110Q30KQ9 67 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 TCTE1Q5JU00 501 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 RBM20Q5T481 1227 aaKnown RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 HECTD2Q5U5R9 776 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 RHBDD2Q6NTF9 364 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 FIGLAQ6QHK4 219 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 CYHR1Q6ZMK1 362 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 CEP128Q6ZU80 1094 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 UBE2R2Q712K3 238 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-203ENST00000391855 CYS1Q717R9 158 aa12.19□□□□□ -0.46
GGPS1-203ENST00000391855 PIWIL4Q7Z3Z4 852 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms