RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C7P10643 843 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 HALP42357 657 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 IRF8Q02556 426 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 ABRQ12979 859 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 CHIT1Q13231 466 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 CYP51A1Q16850 503 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 ZBTB49Q6ZSB9 765 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 IFNEQ86WN2 208 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 GALNT4Q8N4A0 578 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 CPA6Q8N4T0 437 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 LINC00615Q96LM1 132 aaPredicted RBP22.47■■□□□ 1.19
VPS16-201ENST00000380443 TMEM74Q96NL1 305 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 TRAPPC9Q96Q05 1148 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 MAN2B2Q9Y2E5 1009 aa22.47■■□□□ 1.19
VPS16-201ENST00000380443 C17orf113A0A1B0GUU1 675 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 CLGNO14967 610 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 INPP4BO15327 924 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 SPINT1O43278 529 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 LINGO3P0C6S8 592 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 ZCCHC18P0CG32 403 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 ADRB3P13945 408 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 HOXB6P17509 224 aaKnown RBP22.46■■□□□ 1.19
VPS16-201ENST00000380443 NRIP1P48552 1158 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 GTF2H3Q13889 308 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 POM121L1PQ3SYA9 428 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 ZNF658BQ4V348 819 aaPredicted RBP22.46■■□□□ 1.19
VPS16-201ENST00000380443 AGTRAPQ6RW13 159 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 SUSD1Q6UWL2 747 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 TERB1Q8NA31 727 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 OR56A3Q8NH54 315 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 NSMCE2Q96MF7 247 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 PPM1MQ96MI6 270 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 FAM129BQ96TA1 746 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 WRAP53Q9BUR4 548 aaKnown RBP22.46■■□□□ 1.19
VPS16-201ENST00000380443 C9orf16Q9BUW7 83 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 HDAC8Q9BY41 377 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 SEMA6AQ9H2E6 1030 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 STOX2Q9P2F5 926 aaPredicted RBP22.46■■□□□ 1.19
VPS16-201ENST00000380443 MAPRE3Q9UPY8 281 aa22.46■■□□□ 1.19
VPS16-201ENST00000380443 RECQL5O94762 991 aaPredicted RBP22.45■■□□□ 1.19
VPS16-201ENST00000380443 YBX1P67809 324 aaKnown RBP22.45■■□□□ 1.19
VPS16-201ENST00000380443 PRKCQQ04759 706 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 ZNF234Q14588 700 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 DPY19L1Q2PZI1 675 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 ZNF648Q5T619 568 aaPredicted RBP22.45■■□□□ 1.19
VPS16-201ENST00000380443 C10orf62Q5T681 223 aaPredicted RBP22.45■■□□□ 1.19
VPS16-201ENST00000380443 GLYATQ6IB77 296 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 FKBP9P1Q75LS8 142 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 VN1R2Q8NFZ6 395 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 OR52E4Q8NGH9 312 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 MTFMTQ96DP5 389 aaKnown RBP22.45■■□□□ 1.19
VPS16-201ENST00000380443 CDX2Q99626 313 aaPredicted RBP22.45■■□□□ 1.19
VPS16-201ENST00000380443 KCNH6Q9H252 994 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 TRIM39Q9HCM9 518 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 GPR34Q9UPC5 381 aa22.45■■□□□ 1.19
VPS16-201ENST00000380443 MUC22E2RYF6 1773 aaPredicted RBP22.45■■□□□ 1.18
VPS16-201ENST00000380443 H0YIV9 168 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 VEGFDO43915 354 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 ITPKAP23677 461 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 EIF2DP41214 584 aaKnown RBP22.45■■□□□ 1.18
VPS16-201ENST00000380443 GPR1P46091 355 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 GRHL2Q6ISB3 625 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 ERN2Q76MJ5 926 aaKnown RBP22.45■■□□□ 1.18
VPS16-201ENST00000380443 AMIGO2Q86SJ2 522 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 SUSD6Q92537 303 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 PYCR2Q96C36 320 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 GBP5Q96PP8 586 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 OR52E6Q96RD3 313 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 ATG10Q9H0Y0 220 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 GORASP2Q9H8Y8 452 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 BRF2Q9HAW0 419 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 ITM2BQ9Y287 266 aa22.45■■□□□ 1.18
VPS16-201ENST00000380443 H3BM21 787 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 LZTS3O60299 673 aaPredicted RBP22.44■■□□□ 1.18
VPS16-201ENST00000380443 TNFAIP8O95379 198 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 SOD1P00441 154 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 AMD1P17707 334 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 S100A3P33764 101 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 TXNL4AP83876 142 aaKnown RBP22.44■■□□□ 1.18
VPS16-201ENST00000380443 E2F2Q14209 437 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 RUNDC3AQ59EK9 446 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.44■■□□□ 1.18
VPS16-201ENST00000380443 SPANXN4Q5MJ08 99 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 LRIF1Q5T3J3 769 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 FAM46CQ5VWP2 391 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 ATG9BQ674R7 924 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 GPR149Q86SP6 731 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 MFSD2AQ8NA29 543 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 STARD8Q92502 1023 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 BIRC7Q96CA5 298 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 ITCHQ96J02 903 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 GUCD1Q96NT3 240 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 HPS4Q9NQG7 708 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 MYO7AQ13402 2215 aa22.44■■□□□ 1.18
VPS16-201ENST00000380443 A0A096LPI6 279 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 TMEM202A6NGA9 273 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 ANXA6P08133 673 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 CDH1P12830 882 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 C6P13671 934 aa22.43■■□□□ 1.18
VPS16-201ENST00000380443 GGT1P19440 569 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms