RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 RDH11Q8TC12 318 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 ZNF606Q8WXB4 792 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 LENG9Q96B70 501 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 EBNA1BP2Q99848 306 aaKnown RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 C1QTNF1Q9BXJ1 281 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 CPEB1Q9BZB8 566 aaKnown RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 ILKAPQ9H0C8 392 aaPredicted RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 RACGAP1Q9H0H5 632 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 MEAF6Q9HAF1 191 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 C3orf14Q9HBI5 128 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 ZC4H2Q9NQZ6 224 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 CISHQ9NSE2 258 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 MUTYHQ9UIF7 546 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 NDUFAF1Q9Y375 327 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 HSPB11Q9Y547 144 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 URB1O60287 2271 aaKnown RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 TMEM88BA6NKF7 163 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 HNRNPCL2B2RXH8 293 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SIGLEC6O43699 453 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SRP72O76094 671 aaKnown RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 MED26O95402 600 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 CXCL8P10145 99 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 RAC2P15153 192 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 ACSL1P33121 698 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 BRCC3P46736 316 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 VEGFBP49765 207 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 CDH13P55290 713 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 KCNK10P57789 538 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 GCNT1Q02742 428 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 CYP24A1Q07973 514 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 DUSP4Q13115 394 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 EXOSC2Q13868 293 aaKnown RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 UGCGQ16739 394 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 TMEM95Q3KNT9 176 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 TCTE1Q5JU00 501 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 TTC23Q5W5X9 447 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SLC27A4Q6P1M0 643 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 CES3Q6UWW8 571 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 ZZZ3Q8IYH5 903 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SPPL2BQ8TCT7 592 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 RORBQ92753 470 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SLC38A4Q969I6 547 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 HPDLQ96IR7 371 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 CAPNS2Q96L46 248 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 FAM193BQ96PV7 902 aaPredicted RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 BBS4Q96RK4 519 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 CYP2S1Q96SQ9 504 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 GAL3ST1Q99999 423 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 NIF3L1Q9GZT8 377 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SDCBP2Q9H190 292 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SAV1Q9H4B6 383 aaPredicted RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SARS2Q9NP81 518 aaKnown RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 PAK6Q9NQU5 681 aaPredicted RBP6.43□□□□□ -1.38
RIPK1-202ENST00000380409 TMLHEQ9NVH6 421 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 ZNF358Q9NW07 568 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 UBP1Q9NZI7 540 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 RPS6KA6Q9UK32 745 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SLC6A14Q9UN76 642 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 PCDHGA2Q9Y5H1 932 aa6.43□□□□□ -1.38
RIPK1-202ENST00000380409 SCN9AQ15858 1988 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 APOC4-APOC2K7ER74 178 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 PRMT5O14744 637 aaPredicted RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 PCDHGA12O60330 932 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 ENDOD1O94919 500 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 WDR47O94967 919 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 APOC2P02655 101 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 SERPINF2P08697 491 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 ACAA1P09110 424 aaPredicted RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 CCNYL3P0C7X3 344 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 ACO1P21399 889 aaKnown RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 RNF144AP50876 292 aaPredicted RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 RPL7AP62424 266 aaKnown RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 ERVK-8P63133 956 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 HOXC5Q00444 222 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 EPS8Q12929 822 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 SEMA3AQ14563 771 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 LARS2Q15031 903 aaKnown RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 PGM5Q15124 567 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 TSC22D1Q15714 1073 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 TAB1Q15750 504 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 PRSS36Q5K4E3 855 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 RAP1GAP2Q684P5 730 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 GLYATQ6IB77 296 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 CAPN13Q6MZZ7 669 aaPredicted RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 LRRC8EQ6NSJ5 796 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 MOXD1Q6UVY6 613 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 PAMR1Q6UXH9 720 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 STRA8Q7Z7C7 330 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 FAM131BQ86XD5 332 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 TIGD4Q8IY51 512 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 SLC13A3Q8WWT9 602 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 MYDGFQ969H8 173 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 CGRRF1Q99675 332 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 GBA2Q9HCG7 927 aaPredicted RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 PXMP2Q9NR77 195 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 TRMT13Q9NUP7 481 aaKnown RBP6.42□□□□□ -1.38
RIPK1-202ENST00000380409 ERVK13-1Q9NX77 482 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 SLC17A6Q9P2U8 582 aa6.42□□□□□ -1.38
RIPK1-202ENST00000380409 TMEFF2Q9UIK5 374 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms