RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ZCWPW2A0A1B0GU75 182 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 FZD9O00144 591 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 JUNP05412 331 aaKnown RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 DCST1Q5T197 706 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 OR5B17Q8NGF7 314 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 HERVK_113Q902F9 699 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TP73O15350 636 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 BTG1P62324 171 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 GNA12Q03113 381 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CBX3Q13185 183 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SLC9A5Q14940 896 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 PLEKHG7Q6ZR37 379 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TNS4Q8IZW8 715 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TTYH1Q9H313 450 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CHRNA1P02708 482 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ERCC1P07992 297 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RHOCP08134 193 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SH3PXD2AQ5TCZ1 1133 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 NDNFQ8TB73 568 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CDCA4Q9BXL8 241 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 KCTD19Q17RG1 926 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 TMEM27Q9HBJ8 222 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ATP6AP2A0A1C7CYW4 349 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 H0Y858 1186 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 LILRB3O75022 631 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ACADLP28330 430 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ADORA2BP29275 332 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 GGT5P36269 586 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 LRP8Q14114 963 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CLEC14AQ86T13 490 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RANBP3LQ86VV4 465 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RNF130Q86XS8 419 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF384Q8TF68 577 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 S100A16Q96FQ6 103 aaKnown RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 NT5MQ9NPB1 228 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 INPPL1O15357 1258 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 KCNQ2O43526 872 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 DLGAP3O95886 979 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 NANOGP8Q6NSW7 305 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 RBM18Q96H35 190 aaKnown RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 COPS4Q9BT78 406 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 NANOGQ9H9S0 305 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 MYO1GB0I1T2 1018 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CLCA4Q14CN2 919 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SETMARQ53H47 684 aaPredicted RBP4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CCDC3Q9BQI4 270 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 MED28Q9H204 178 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 COMMD9Q9P000 198 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 NR5A2O00482 541 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 ACSL4O60488 711 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 DCAF12L1Q5VU92 463 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SEMA3CQ99985 751 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 HMX3A6NHT5 357 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 CLIC1O00299 241 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SERPINA13PQ6UXR4 307 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 SMPDL3AQ92484 453 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 POLHQ9Y253 713 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 MAB21L2Q9Y586 359 aa4.83□□□□□ -1.64
PCDH9-201ENST00000377861 HS6ST1O60243 411 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 MMP2P08253 660 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RGMAQ96B86 450 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PPCDCQ96CD2 204 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 MLXIPLQ9NP71 852 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 E2F8A0AVK6 867 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 GOT1P17174 413 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 BUD31P41223 144 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PITPNBP48739 271 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RAB41Q5JT25 222 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SPRED1Q7Z699 444 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CARM1Q86X55 608 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PAK1IP1Q9NWT1 392 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CXCR6O00574 342 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 COX7A2P14406 83 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 HMGA2P52926 109 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SEZ6Q53EL9 994 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RNF19BQ6ZMZ0 732 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF765Q7L2R6 523 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 OR8H2Q8N162 312 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 COG8Q96MW5 612 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 MED18Q9BUE0 208 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CAB39LQ9H9S4 337 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 YDJCA8MPS7 323 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 E9PAM4 449 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CREG1O75629 220 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 S1PR4O95977 384 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CD1EP15812 388 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RAB40BQ12829 278 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SH2D5Q6ZV89 423 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 LRRN4CLQ8ND94 238 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PHYHO14832 338 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ACOX3O15254 700 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TAS2R39P59534 338 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CDK10Q15131 360 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ADNP2Q6IQ32 1131 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 KIAA1161Q6NSJ0 714 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ZFAND4Q86XD8 727 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 HS6ST3Q8IZP7 471 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TEX47Q8TBZ9 253 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 RCN3Q96D15 328 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms