RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PPP3R1P63098 170 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 OLFML2AQ68BL7 652 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 TMEM156Q8N614 296 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 OR5M3Q8NGP4 307 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 ROPN1LQ96C74 230 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 USP29Q9HBJ7 922 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 MKKSQ9NPJ1 570 aaPredicted RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 PRORSD1PA6NEY8 169 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 HMGCS1Q01581 520 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 MC1RQ01726 317 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 KLF1Q13351 362 aaPredicted RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 SCARB2Q14108 478 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 FAM131AQ6UXB0 335 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 LRRC70Q7Z2Q7 622 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 PIM3Q86V86 326 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 OVCA2Q8WZ82 227 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 FATE1Q969F0 183 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 TMEM248Q9NWD8 314 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 A8MUI8 341 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 B4GALT2O60909 372 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 IQCF3P0C7M6 154 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 PRKAR1AP10644 381 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CXCR1P25024 350 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 NDUFA5Q16718 116 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 PRRT3Q5FWE3 981 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 DENND5AQ6IQ26 1287 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 FBXO42Q6P3S6 717 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 RBM44Q6ZP01 1051 aaKnown RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 IQCKQ8N0W5 287 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 MAPK15Q8TD08 544 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 RFKQ969G6 155 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 NKX2-4Q9H2Z4 354 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 PAPSS2O95340 614 aaPredicted RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 JMJD7P0C870 316 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CBX5P45973 191 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 KCNJ5P48544 419 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CCINQ13939 588 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 TMEM126BQ8IUX1 230 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 OR5AK3PQ8NH89 298 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 SMPDL3AQ92484 453 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 TPK1Q9H3S4 243 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CA14Q9ULX7 337 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 DUXAA6NLW8 204 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 RGS10O43665 173 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 PCDHGA12O60330 932 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 AP2A2O94973 939 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CYB5AP00167 134 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CBSLP0DN79 551 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CBSP35520 551 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 TDRPQ86YL5 185 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 KLRF1Q9NZS2 232 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 A0A075B6Q4 140 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 ZNF726A6NNF4 738 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 KHNYNO15037 678 aaKnown RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 RENP00797 406 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 IMPDH1P20839 514 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 GANABQ14697 944 aaKnown RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 SIAH1Q8IUQ4 282 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 ZDHHC21Q8IVQ6 265 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CMASQ8NFW8 434 aaPredicted RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 OR5T3Q8NGG3 340 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 SLC35A5Q9BS91 424 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 COMMD4Q9H0A8 199 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 SSU72Q9NP77 194 aaKnown RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 M0R2N6 131 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 TRAPPC6AO75865 159 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 SIX3O95343 332 aaPredicted RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 CHERPQ8IWX8 916 aaKnown RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 OR2L5Q8NG80 312 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 OR10H4Q8NGA5 316 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.32□□□□□ -0.28
GPC6-201ENST00000377047 PIGUQ9H490 435 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 LDAHQ9H6V9 325 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 NCDNQ9UBB6 729 aa13.32□□□□□ -0.28
GPC6-201ENST00000377047 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.32□□□□□ -0.28
GPC6-201ENST00000377047 A0A0D9SEW6 157 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 PRDX6P30041 224 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 ADARP55265 1226 aaKnown RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 MAPK14Q16539 360 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 NAT8LQ8N9F0 302 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 NSMCE3Q96MG7 304 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 C16orf70Q9BSU1 422 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 BHLHE41Q9C0J9 482 aaPredicted RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 RSL24D1Q9UHA3 163 aaKnown RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 UTS2RQ9UKP6 389 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 TULP3O75386 442 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 RPL6Q02878 288 aaKnown RBP13.31□□□□□ -0.28
GPC6-201ENST00000377047 CREB5Q02930 508 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 TARDBPQ13148 414 aaKnown RBP eCLIP13.31□□□□□ -0.28
GPC6-201ENST00000377047 SPIN4Q56A73 249 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 SLC39A5Q6ZMH5 540 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 GALNTL5Q7Z4T8 443 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 NXPE1Q8N323 547 aa13.31□□□□□ -0.28
GPC6-201ENST00000377047 CEP295NLQ96MC4 621 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms