RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TMEM151BQ8IW70 566 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 FAM26EQ8N5C1 309 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 CLEC18CQ8NCF0 446 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 LPGAT1Q92604 370 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 DLG3Q92796 817 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 FER1L6-AS2Q96M78 137 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 FOPNLQ96NB1 174 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 SMAD5Q99717 465 aaKnown RBP13.66□□□□□ -0.22
NELFE-201ENST00000375425 RAB11FIP5Q9BXF6 653 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 SLC22A11Q9NSA0 550 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 ANKMY1Q9P2S6 941 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 VPS4AQ9UN37 437 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 CRYL1Q9Y2S2 319 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 MRFAP1Q9Y605 127 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 TNRC6AQ8NDV7 1962 aaKnown RBP13.66□□□□□ -0.22
NELFE-201ENST00000375425 TARM1B6A8C7 271 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 PEX12O00623 359 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 PFDN6O15212 129 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 UMODP07911 640 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 CHRM3P20309 590 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 MCM3P25205 808 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 BDKRB1P46663 353 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 SARNPP82979 210 aaKnown RBP13.65□□□□□ -0.22
NELFE-201ENST00000375425 CCZ1BP86790 482 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 CCZ1P86791 482 aaPredicted RBP13.65□□□□□ -0.22
NELFE-201ENST00000375425 GPS1Q13098 491 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 KCNJ11Q14654 390 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 TYSND1Q2T9J0 566 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 DCAF10Q5QP82 559 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 JMJD6Q6NYC1 403 aaPredicted RBP13.65□□□□□ -0.22
NELFE-201ENST00000375425 CNSTQ6PJW8 725 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 HPS6Q86YV9 775 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 RBMXL3Q8N7X1 1067 aaKnown RBP13.65□□□□□ -0.22
NELFE-201ENST00000375425 MAGEC3Q8TD91 643 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 DENND1AQ8TEH3 1009 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 FAM136AQ96C01 138 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 TCF12Q99081 682 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 MIPEPQ99797 713 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 P4HTMQ9NXG6 502 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
NELFE-201ENST00000375425 PPP2R2CQ9Y2T4 447 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 MAP4K5Q9Y4K4 846 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 PTPN13Q12923 2485 aa13.65□□□□□ -0.22
NELFE-201ENST00000375425 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 A0A1B0GX78 115 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 H3BMM5 538 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 NIPSNAP2O75323 286 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 SORBS2O94875 1100 aaKnown RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 MATN4O95460 622 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 KRT14P02533 472 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 ESR1P03372 595 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 ITGAXP20702 1163 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 PSMB5P28074 263 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 CCNFP41002 786 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 MAGEA6P43360 314 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 ADARP55265 1226 aaKnown RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 TCTE1Q5JU00 501 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 RNF187Q5TA31 235 aaPredicted RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 ANKRD22Q5VYY1 191 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 KIAA0930Q6ICG6 404 aaPredicted RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 TTC27Q6P3X3 843 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 CASC4Q6P4E1 433 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 CAND1Q86VP6 1230 aaKnown RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 GALNT16Q8N428 558 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 RAB42Q8N4Z0 105 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 CLEC1AQ8NC01 280 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 HMGCLL1Q8TB92 370 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 COL26A1Q96A83 441 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 MS4A14Q96JA4 679 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 SELENOSQ9BQE4 189 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 TRIM56Q9BRZ2 755 aaKnown RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 SLAMF7Q9NQ25 335 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 CUTCQ9NTM9 273 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 IL1RAPL1Q9NZN1 696 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 LUZP4Q9P127 313 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 GALPQ9UBC7 116 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 DOPEY2Q9Y3R5 2298 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 LRRK2Q5S007 2527 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 PCSK5Q92824 1860 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 A0A1W2PPV9 198 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 MASP2O00187 686 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 SRPX2O60687 465 aaPredicted RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 CTSVO60911 334 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 FKBP9O95302 570 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 ONECUT2O95948 504 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 IGHEP01854 428 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 PIM1P11309 404 aaPredicted RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 PAMP19021 973 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 GNLYP22749 145 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 UQCRFS1P47985 274 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 FASTKQ14296 549 aaKnown RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 GBX1Q14549 363 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 GRM7Q14831 915 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 INPP5JQ15735 1006 aaPredicted RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 VWA5B1Q5TIE3 1220 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 YOD1Q5VVQ6 348 aaPredicted RBP13.64□□□□□ -0.23
NELFE-201ENST00000375425 SLC6A19Q695T7 634 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 NEPROQ6NW34 567 aa13.64□□□□□ -0.23
NELFE-201ENST00000375425 OVCH1Q7RTY7 1134 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms