RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ASZ1Q8WWH4 475 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 ASB11Q8WXH4 323 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 NELL1Q92832 810 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 NCLNQ969V3 563 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 TESCQ96BS2 214 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 ZNF707Q96C28 371 aaPredicted RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 MRPL38Q96DV4 380 aaKnown RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 MAGED4Q96JG8 741 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 CNDP2Q96KP4 475 aaKnown RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 ZNF583Q96ND8 569 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 ING2Q9H160 280 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 BRD9Q9H8M2 597 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 ZFP14Q9HCL3 533 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 TDP1Q9NUW8 608 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 DDX18Q9NVP1 670 aaKnown RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 SLAMF8Q9P0V8 285 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 NFKBIL1Q9UBC1 381 aaPredicted RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 PCDHGB4Q9UN71 923 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 PDE10AQ9Y233 779 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 MRPS23Q9Y3D9 190 aaKnown RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 PCDHGB5Q9Y5G0 923 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 A0A0U1RQS6 177 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 TRIM64A6NGJ6 449 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 G3V2T6 193 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 WNT9AO14904 365 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 BNIP3LO60238 219 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 MOSPD3O75425 235 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 CST1P01037 141 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 UGT2B4P06133 528 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 BCKDHAP12694 445 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HSD3B1P14060 373 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HSD3B2P26439 372 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 GKP32189 559 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 CCR7P32248 378 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 GDF5P43026 501 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 TRPC1P48995 793 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 ARHGDIAP52565 204 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 ZXDBP98169 803 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HMGCS1Q01581 520 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 PTSQ03393 145 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 SRSF11Q05519 484 aaKnown RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 ABHD18Q0P651 414 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 LRRC74AQ0VAA2 488 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 CPSF6Q16630 551 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBR4-203ENST00000375225 ZNF284Q2VY69 593 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 C11orf91Q3C1V1 193 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 PLA2G4EQ3MJ16 856 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 ATP13A5Q4VNC0 1218 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 SYTL3Q4VX76 610 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 SPANXN4Q5MJ08 99 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 LDLRAP1Q5SW96 308 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 LRIF1Q5T3J3 769 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 ERICH5Q6P6B1 374 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 GPR149Q86SP6 731 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 GPR180Q86V85 440 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HIPK1Q86Z02 1210 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 TRAM1L1Q8N609 369 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 OR10A6Q8NH74 314 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HCAR2Q8TDS4 363 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 FBXL8Q96CD0 374 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 OTUB2Q96DC9 234 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 LRIG1Q96JA1 1093 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 LMLNQ96KR4 655 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 RPL10LQ96L21 214 aaKnown RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 FOPNLQ96NB1 174 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HBEGFQ99075 208 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HEPHQ9BQS7 1158 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 ZSCAN5AQ9BUG6 496 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 FAM83DQ9H4H8 585 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 PIF1Q9H611 641 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HPS4Q9NQG7 708 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 USE1Q9NZ43 259 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 VAPAQ9P0L0 249 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 TMEM9Q9P0T7 183 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 IFT80Q9P2H3 777 aaPredicted RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 INTS6Q9UL03 887 aaKnown RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 SAMD4AQ9UPU9 718 aaKnown RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 AP1M2Q9Y6Q5 423 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 NOTCH4Q99466 2003 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 CEP290O15078 2479 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 DLGAP1O14490 977 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 SLC9A3R1O14745 358 aaPredicted RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 DFNA5O60443 496 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 PAPLNO95428 1278 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 PDYNP01213 254 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 C1SP09871 688 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 TCF3P15923 654 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 POLR2EP19388 210 aaKnown RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 PRPS1L1P21108 318 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 SLC6A12P48065 614 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 HLCSP50747 726 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 RAD23AP54725 363 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 NTHL1P78549 312 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 ADARB1P78563 741 aaKnown RBP11.91□□□□□ -0.5
UBR4-203ENST00000375225 HSPA14Q0VDF9 509 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 PTGR1Q14914 329 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 CYBRD1Q53TN4 286 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 FAM219BQ5XKK7 198 aa11.91□□□□□ -0.5
UBR4-203ENST00000375225 FRG2Q64ET8 278 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms