RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SRRDQ9UH36 339 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 GPN3Q9UHW5 284 aaPredicted RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 EMCNQ9ULC0 261 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 ZNF175Q9Y473 711 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 PCDHB5Q9Y5E4 795 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 PDCD5O14737 125 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 NARSO43776 548 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 UBA1P22314 1058 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 CDH4P55283 916 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 RGS1Q08116 209 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 ARHGAP15Q53QZ3 475 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 GPRC6AQ5T6X5 926 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 MAVSQ7Z434 540 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 ANKRD46Q86W74 232 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TSPEARQ8WU66 669 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 C12orf66Q96MD2 445 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 SLC38A2Q96QD8 506 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 RPL36Q9Y3U8 105 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 IRAK3Q9Y616 596 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 IRS2Q9Y4H2 1338 aa10.02□□□□□ -0.8
CD28-202ENST00000374481 A0A1W2PQL4 384 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 KANTRA0A1W2PQU2 76 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 IRGMA1A4Y4 181 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 WASHC1A8K0Z3 465 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 C1orf196B1AJZ1 125 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 SLC28A1O00337 649 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 TXNL1O43396 289 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 SCO2O43819 266 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 MITFO75030 526 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 CD2P06729 351 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 LHCGRP22888 699 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 FAUP35544 74 aaKnown RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 GNPDA1P46926 289 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 CENPAP49450 140 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 PPP3R1P63098 170 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 GALK2Q01415 458 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 MARC1Q5VT66 337 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 HS3ST5Q8IZT8 346 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 GHDCQ8N2G8 530 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 OR7G3Q8NG95 312 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 OR5T2Q8NGG2 359 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 ERVK-6Q9BXR3 956 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 DUSP16Q9BY84 665 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 THUMPD1Q9NXG2 353 aaKnown RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 ZIM2Q9NZV7 527 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 FAM25EA8MYX2 175 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 G3V2L1 256 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 HCN1O60741 890 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 JUNP05412 331 aaKnown RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 CLTBP09497 229 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 ZBTB48P10074 688 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 CHMP24386 653 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 ADIGQ0VDE8 80 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 AQP6Q13520 282 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 DUSP6Q16828 381 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 SLC35G1Q2M3R5 365 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 MAP1SQ66K74 1059 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 PDE12Q6L8Q7 609 aaKnown RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 CDC42EP5Q6NZY7 148 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 ZCCHC12Q6PEW1 402 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 ZPBP2Q6X784 338 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 CYS1Q717R9 158 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 TSPYL5Q86VY4 417 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 C12orf45Q8N5I9 185 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 GPR151Q8TDV0 419 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 EMID1Q96A84 441 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 TCEAL7Q9BRU2 100 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 NUSAP1Q9BXS6 441 aaKnown RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 NIT2Q9NQR4 276 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 CD300AQ9UGN4 299 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 CYTH4Q9UIA0 394 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 METTL15A6NJ78 407 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 BNIP3LO60238 219 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 OR4F21O95013 312 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 C1RP00736 705 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 CST3P01034 146 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 JUPP14923 745 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 CTRB1P17538 263 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 ERVK-21P61565 698 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 CTRB2Q6GPI1 263 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 SYNPOQ8N3V7 929 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 ANKK1Q8NFD2 765 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 TRIM43Q96BQ3 446 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 ZYG11BQ9C0D3 744 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 MEAF6Q9HAF1 191 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 PRMT7Q9NVM4 692 aaPredicted RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 ZNF69Q9UC07 566 aa10.02□□□□□ -0.81
CD28-202ENST00000374481 YARS2Q9Y2Z4 477 aaKnown RBP10.02□□□□□ -0.81
CD28-202ENST00000374481 A0A1W2PPL8 197 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 C2CD4BA6NLJ0 364 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 TTLL8A6PVC2 850 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 TOR1AO14656 332 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 STX16O14662 325 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 CHST10O43529 356 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 UGT2B17O75795 530 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 AHSGP02765 367 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 ACADLP28330 430 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 GPC1P35052 558 aa10.01□□□□□ -0.81
CD28-202ENST00000374481 MAN2A2P49641 1150 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms