RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 GRM7Q14831 915 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 ZNF169Q14929 603 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-202ENST00000374426 FIGLAQ6QHK4 219 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 ZNF534Q76KX8 674 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 DCUN1D3Q8IWE4 304 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 PARP9Q8IXQ6 854 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 DTWD1Q8N5C7 304 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 OR11G2Q8NGC1 345 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 SLC35B2Q8TB61 432 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 LKAAEAR1Q8TD35 194 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 COG1Q8WTW3 980 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 FAR1Q8WVX9 515 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 SLC22A18Q96BI1 424 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 CNDP1Q96KN2 507 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 CALR3Q96L12 384 aaKnown RBP13.21□□□□□ -0.29
CXCL12-202ENST00000374426 ZNF778Q96MU6 729 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 MESP1Q9BRJ9 268 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 LACRTQ9GZZ8 138 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 LHPPQ9H008 270 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 TSPY26PQ9H489 355 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 SOX17Q9H6I2 414 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-202ENST00000374426 NXT1Q9UKK6 140 aaKnown RBP13.21□□□□□ -0.29
CXCL12-202ENST00000374426 OSGIN2Q9Y236 505 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 REXO2Q9Y3B8 237 aaKnown RBP13.21□□□□□ -0.29
CXCL12-202ENST00000374426 EPN1Q9Y6I3 576 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-202ENST00000374426 CSMD2Q7Z408 3487 aa13.21□□□□□ -0.29
CXCL12-202ENST00000374426 FITM1A5D6W6 292 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 GOLGA6L9A6NEM1 432 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 VSTM2BA6NLU5 285 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 IQCF5A8MTL0 148 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 BTNL10A8MVZ5 291 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 PSMD3O43242 534 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 CTSVO60911 334 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 EDN3P14138 238 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 OR1D4P47884 311 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 ACVR1Q04771 509 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 CDH17Q12864 832 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 CDC16Q13042 620 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 SEMA3AQ14563 771 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 TLR1Q15399 786 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 SF1Q15637 639 aaKnown RBP13.2□□□□□ -0.3
CXCL12-202ENST00000374426 RBBP7Q16576 425 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 TUBB8Q3ZCM7 444 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 ZC3H12BQ5HYM0 836 aaKnown RBP13.2□□□□□ -0.3
CXCL12-202ENST00000374426 TCTE1Q5JU00 501 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 IRAK1BP1Q5VVH5 260 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 YOD1Q5VVQ6 348 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-202ENST00000374426 B3GNTL1Q67FW5 361 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-202ENST00000374426 AFTPHQ6ULP2 937 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 LINC00523Q86TU6 105 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 METTL27Q8N6F8 245 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-202ENST00000374426 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 CFAP61Q8NHU2 1237 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 ASZ1Q8WWH4 475 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 SLX1AQ9BQ83 275 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 EPS8L2Q9H6S3 715 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 SEMA3GQ9NS98 782 aa13.2□□□□□ -0.3
CXCL12-202ENST00000374426 INTS7Q9NVH2 962 aaKnown RBP13.2□□□□□ -0.3
CXCL12-202ENST00000374426 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-202ENST00000374426 DCHS2Q6V1P9 2916 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 TCRBV7S2A1N4TA0A589 114 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 HEATR9A2RTY3 570 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 F8W8V4 182 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 RASGRF2O14827 1237 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 PRICKLE3O43900 615 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-202ENST00000374426 ZG16O60844 167 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 SLCO2B1O94956 709 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 MED26O95402 600 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 RPN2P04844 631 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 PTMAP06454 111 aaKnown RBP13.19□□□□□ -0.3
CXCL12-202ENST00000374426 AOAHP28039 575 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 GRIA1P42261 906 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 PER3P56645 1201 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 ZRSR2Q15696 482 aaKnown RBP13.19□□□□□ -0.3
CXCL12-202ENST00000374426 TSTD2Q5T7W7 516 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 UNC5DQ6UXZ4 953 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 SRRM1Q8IYB3 904 aaKnown RBP13.19□□□□□ -0.3
CXCL12-202ENST00000374426 SLC34A3Q8N130 599 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 DNAAF3Q8N9W5 541 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 OR4L1Q8NH43 312 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 THOC3Q96J01 351 aaKnown RBP13.19□□□□□ -0.3
CXCL12-202ENST00000374426 TTC1Q99614 292 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 SELENOSQ9BQE4 189 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 CARD6Q9BX69 1037 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 RIMKLBQ9ULI2 386 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-202ENST00000374426 MAU2Q9Y6X3 613 aa13.19□□□□□ -0.3
CXCL12-202ENST00000374426 ERI2A8K979 691 aaKnown RBP13.18□□□□□ -0.3
CXCL12-202ENST00000374426 NRP2O60462 931 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 KLHL18O94889 574 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 SUN1O94901 812 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 APOA4P06727 396 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 STSP08842 583 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 PRF1P14222 555 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 PTMSP20962 102 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 PSMB5P28074 263 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 VSX2P58304 361 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms