RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 SCAMP5Q8TAC9 235 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 PIGXQ8TBF5 258 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 GPR22Q99680 433 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 PKP2Q99959 881 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 MRM3Q9HC36 420 aaKnown RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 OR51F1A6NGY5 319 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 SLC2A2P11168 524 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 CD247P20963 164 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 FMO3P31513 532 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 SP2Q02086 613 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 LINGO2Q7L985 606 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 CFAP206Q8IYR0 622 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 HDDC3Q8N4P3 179 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 TMEM27Q9HBJ8 222 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 M0R036 132 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 CYP11A1P05108 521 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 C8BP07358 591 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 GNAO1P09471 354 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 ALDH4A1P30038 563 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 YAP1P46937 504 aaKnown RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 GALNT12Q8IXK2 581 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 FUBP3Q96I24 572 aaKnown RBP eCLIP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 GPR88Q9GZN0 384 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 COMMD4Q9H0A8 199 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 ZNF395Q9H8N7 513 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 RDH8Q9NYR8 311 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 LRRC42Q9Y546 428 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 NUP188Q5SRE5 1749 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 CCL16O15467 120 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 PGLSO95336 258 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 PRNPP04156 253 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 GIMD1P0DJR0 217 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 MVKQ03426 396 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 SPATS1Q496A3 300 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 TIGD5Q53EQ6 642 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 CANT1Q8WVQ1 401 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 SCGB3A2Q96PL1 93 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 PHPT1Q9NRX4 125 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 UCKL1Q9NWZ5 548 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 FKBP7Q9Y680 259 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 ZSCAN5BA6NJL1 495 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 FFAR2O15552 330 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 TYROBPO43914 113 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 KRT33AO76009 404 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 FLT3LGP49771 235 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 PPP3R1P63098 170 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 SF1Q15637 639 aaKnown RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 PAQR3Q6TCH7 311 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 PHC3Q8NDX5 983 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 DPF3Q92784 378 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 DUSP26Q9BV47 211 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 DPAGT1Q9H3H5 408 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 PAPSS2O95340 614 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 PCCBP05166 539 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 F7P08709 466 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 MSANTD2Q6P1R3 559 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 CDK15Q96Q40 435 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 CALML5Q9NZT1 146 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 FBXO9Q9UK97 447 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-202ENST00000373474 OAZ3Q9UMX2 235 aa13.91□□□□□ -0.18
LMX1B-202ENST00000373474 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 TMEM233B4DJY2 109 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 AHSGP02765 367 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 FSHRP23945 695 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 TSPAN5P62079 268 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 CRTC2Q53ET0 693 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 ATXN7L2Q5T6C5 722 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 NPAS4Q8IUM7 802 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 OR2L3Q8NG85 312 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 ASB12Q8WXK4 309 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 MRTO4Q9UKD2 239 aaKnown RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 PCDHGA11Q9Y5H2 935 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 ACOX3O15254 700 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 GABBR2O75899 941 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 MOGQ16653 247 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 HAGHLQ6PII5 290 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 OR2L5Q8NG80 312 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 ZNF431Q8TF32 576 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 ZNF487B1APH4 448 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 NME6O75414 186 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 STOMP27105 288 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 MXD1Q05195 221 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 HSPB3Q12988 150 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 FBXO43Q4G163 708 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 ARMC10Q8N2F6 343 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 PHTF2Q8N3S3 785 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 SEC14L1Q92503 715 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 STYXL1Q9Y6J8 313 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 PSMD8P48556 350 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 PQLC3Q8N755 202 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 PEBP4Q96S96 227 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 TUBA1CQ9BQE3 449 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 HEPHQ9BQS7 1158 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 CCDC106Q9BWC9 280 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 MRPS33Q9Y291 106 aaKnown RBP13.9□□□□□ -0.18
LMX1B-202ENST00000373474 C5orf51A6NDU8 294 aa13.9□□□□□ -0.18
LMX1B-202ENST00000373474 SAGP10523 405 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms