RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 MRPL46Q9H2W6 279 aaKnown RBP10.15□□□□□ -0.78
COL5A1-202ENST00000371820 LRRN3Q9H3W5 708 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 ASCL3Q9NQ33 180 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 C8orf4Q9NR00 106 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 THSD1Q9NS62 852 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 NFKBIL1Q9UBC1 381 aaPredicted RBP10.15□□□□□ -0.78
COL5A1-202ENST00000371820 APPL1Q9UKG1 709 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 PCDHGA8Q9Y5G5 932 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 ENTPD2Q9Y5L3 495 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 COMMD3-BMI1R4GMX3 469 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 CCDC187A0A096LP49 1063 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 GPR89AB7ZAQ6 455 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 NTN3O00634 580 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 NOBOXO60393 691 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 EPOP01588 193 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 GPR89BP0CG08 455 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 SLC2A4P14672 509 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 VCLP18206 1134 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ITGAXP20702 1163 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ATP5F1P24539 256 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 RBMS1P29558 406 aaKnown RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ACTR1BP42025 376 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 CSRP3P50461 194 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ATP4BP51164 291 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 RAB10P61026 200 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ACTR1AP61163 376 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 SLC25A3Q00325 362 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 UBAP2LQ14157 1087 aaKnown RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 IHHQ14623 411 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 CLPPQ16740 277 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 MMEL1Q495T6 779 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 C3orf38Q5JPI3 329 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 HENMT1Q5T8I9 393 aaKnown RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ZDHHC20Q5W0Z9 365 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 PCSK4Q6UW60 755 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 BNC2Q6ZN30 1099 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ZCCHC23Q6ZST2 131 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 LYSMD3Q7Z3D4 306 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ZC3HC1Q86WB0 502 aaKnown RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ARL14Q8N4G2 192 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 AVL9Q8NBF6 648 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 GOLM1Q8NBJ4 401 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 WDR36Q8NI36 951 aaKnown RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ZDHHC1Q8WTX9 485 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 SCAMP4Q969E2 229 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 TADA1Q96BN2 335 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 CCDC97Q96F63 343 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 SCARF2Q96GP6 870 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 LIN37Q96GY3 246 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 COX14Q96I36 57 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 TRIB3Q96RU7 358 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 TBL1YQ9BQ87 522 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 MCMBPQ9BTE3 642 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ZSCAN5AQ9BUG6 496 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 GATA5Q9BWX5 397 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 TRIM4Q9C037 500 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 YIPF3Q9GZM5 350 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ARNT2Q9HBZ2 717 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 IARS2Q9NSE4 1012 aaKnown RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 AKAP7Q9P0M2 348 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 TAAR2Q9P1P5 351 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 CPSF2Q9P2I0 782 aaKnown RBP10.14□□□□□ -0.79
COL5A1-202ENST00000371820 LRIT1Q9P2V4 623 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF711Q9Y462 761 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 MGAQ8IWI9 3026 aa10.14□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 A0A1W2PNU3 283 aaPredicted RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 HEATR9A2RTY3 570 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 RHPN2P1A8MT19 583 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 D6RAR5 112 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 ERVH48-1M5A8F1 160 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 INPP4BO15327 924 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 BUD23O43709 281 aaKnown RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 PMPCBO75439 489 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 GPC4O75487 556 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 LYPLA1O75608 230 aaPredicted RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 MT-CYBP00156 380 aaPredicted RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 SOD1P00441 154 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 RPLP0P05388 317 aaKnown RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 NFKB1P19838 968 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 HLA-DPA1P20036 260 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 PIK3R1P27986 724 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 CCKBRP32239 447 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 CD151P48509 253 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 UCNP55089 124 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 INHBCP55103 352 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 TMPRSS3P57727 454 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 CTBSQ01459 385 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 CDC16Q13042 620 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 PTPRRQ15256 657 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 PYCR3Q53H96 274 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 OGFRL1Q5TC84 451 aaPredicted RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 KIAA0930Q6ICG6 404 aaPredicted RBP10.13□□□□□ -0.79
COL5A1-202ENST00000371820 RFLNAQ6ZTI6 216 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 PHYKPLQ8IUZ5 450 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 PQLC1Q8N2U9 271 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 MARVELD2Q8N4S9 558 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 TRAM1L1Q8N609 369 aa10.13□□□□□ -0.79
COL5A1-202ENST00000371820 CCL4L1Q8NHW4 92 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms