RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CHAF1BQ13112 559 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 CHIT1Q13231 466 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 GFOD2Q3B7J2 385 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 CLEC12AQ5QGZ9 265 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 PAOXQ6QHF9 649 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 C17orf64Q86WR6 236 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 COPS8Q99627 209 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 PKP2Q99959 881 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 PRRG4Q9BZD6 226 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 UCK2Q9BZX2 261 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 FAM83DQ9H4H8 585 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 MDFIC2A0A1B0GVS7 189 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 BUD23O43709 281 aaKnown RBP14.96□□□□□ -0.01
COL5A1-201ENST00000371817 STK16O75716 305 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 MC2RQ01718 297 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 CLCQ05315 142 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 TMEM119Q4V9L6 283 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 CAPN13Q6MZZ7 669 aaPredicted RBP14.96□□□□□ -0.01
COL5A1-201ENST00000371817 PRDM12Q9H4Q4 367 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 FAIMQ9NVQ4 179 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 PARPBPQ9NWS1 579 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 FAM234BA2RU67 622 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 TLR4O00206 839 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 HMGN1P05114 100 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 MC4RP32245 332 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 PIGGQ5H8A4 983 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 POMZP3Q6PJE2 187 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 CANT1Q8WVQ1 401 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 SLC5A7Q9GZV3 580 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 LRFN1Q9P244 771 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 SLC27A6Q9Y2P4 619 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 FUT4P22083 530 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 RPS3AP61247 264 aaKnown RBP14.96□□□□□ -0.01
COL5A1-201ENST00000371817 SREBF2Q12772 1141 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 KIAA1614Q5VZ46 1190 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 RAET1GQ6H3X3 334 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 FAM117BQ6P1L5 589 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 OR8S1Q8NH09 359 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 KCNN1Q92952 543 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 TMBIM1Q969X1 311 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 CAMK1GQ96NX5 476 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 CCDC32Q9BV29 185 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 PLA2G12BQ9BX93 195 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 ABCB8Q9NUT2 735 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 PCDHB5Q9Y5E4 795 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 SULT1C2O00338 296 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 URODP06132 367 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 CEP97Q8IW35 865 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 SAMD12Q8N8I0 201 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 SRRDQ9UH36 339 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 RNF151Q2KHN1 245 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 PTF1AQ7RTS3 328 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 HID1Q8IV36 788 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 RAET1EQ8TD07 263 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 SMARCD2Q92925 531 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 MKRN2Q9H000 416 aaKnown RBP14.96□□□□□ -0.01
COL5A1-201ENST00000371817 OR10A4Q9H209 315 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 CPNE5Q9HCH3 593 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 PCDHB1Q9Y5F3 818 aa14.96□□□□□ -0.01
COL5A1-201ENST00000371817 AGPSO00116 658 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 NPPAP01160 153 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 RPL7AP62424 266 aaKnown RBP14.96□□□□□ -0.02
COL5A1-201ENST00000371817 LSAMPQ13449 338 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 FASTKD3Q14CZ7 662 aaKnown RBP14.96□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF425Q6IV72 752 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 TP63Q9H3D4 680 aaPredicted RBP14.96□□□□□ -0.02
COL5A1-201ENST00000371817 RETREG1Q9H6L5 497 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 CCND3P30281 292 aaPredicted RBP14.96□□□□□ -0.02
COL5A1-201ENST00000371817 GANABQ14697 944 aaKnown RBP14.96□□□□□ -0.02
COL5A1-201ENST00000371817 SPATS1Q496A3 300 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 PHF13Q86YI8 300 aaPredicted RBP14.96□□□□□ -0.02
COL5A1-201ENST00000371817 GTPBP8Q8N3Z3 284 aaPredicted RBP14.96□□□□□ -0.02
COL5A1-201ENST00000371817 ACSS2Q9NR19 701 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 ACTR3BQ9P1U1 418 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 NME7Q9Y5B8 376 aa14.96□□□□□ -0.02
COL5A1-201ENST00000371817 C5orf60A6NFR6 353 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 HMX3A6NHT5 357 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 C9JVG2 144 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 SCAMP3O14828 347 aaKnown RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 MATN4O95460 622 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 IL3P08700 152 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ANXA4P09525 319 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 TAS2R43P59537 309 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 FGFBP1Q14512 234 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 LRRC66Q68CR7 880 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 FAM151BQ6UXP7 276 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ARHGAP12Q8IWW6 846 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 JAGN1Q8N5M9 183 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 BEST4Q8NFU0 473 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 CASTOR1Q8WTX7 329 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 SLC13A3Q8WWT9 602 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 DPF3Q92784 378 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF486Q96H40 463 aaPredicted RBP14.95□□□□□ -0.02
COL5A1-201ENST00000371817 FUNDC2Q9BWH2 189 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 RAB4BP61018 213 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 BCL2A1Q16548 175 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 BAIAP2L2Q6UXY1 529 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 SSX9Q7RTT3 188 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 GRIN3AQ8TCU5 1115 aa14.95□□□□□ -0.02
COL5A1-201ENST00000371817 ZDHHC15Q96MV8 337 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms