RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PLXNB3Q9ULL4 1909 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 A0A087WV62 115 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 GLYATL1P3A0A0U1RQE8 302 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 TBC1D3BA6NDS4 549 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 C4orf47A7E2U8 309 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 NPC1O15118 1278 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 SNNO75324 88 aaPredicted RBP8.59□□□□□ -1.03
TPM3-213ENST00000368545 VPS26AO75436 327 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 APODP05090 189 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 SERPINE1P05121 402 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 RBP1P09455 135 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 ZNF7P17097 686 aaPredicted RBP8.59□□□□□ -1.03
TPM3-213ENST00000368545 XPAP23025 273 aaPredicted RBP8.59□□□□□ -1.03
TPM3-213ENST00000368545 RPS3P23396 243 aaKnown RBP eCLIP8.59□□□□□ -1.03
TPM3-213ENST00000368545 VIPR1P32241 457 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 ADMP35318 185 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 CDKN2DP55273 166 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 IRX4P78413 519 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 STX3Q13277 289 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 NFATC2Q13469 925 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 ITGA9Q13797 1035 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 ZNF234Q14588 700 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 NKPD1Q17RQ9 610 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 UGT3A1Q6NUS8 523 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 C19orf48Q6RUI8 117 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 FAM151BQ6UXP7 276 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 SERPINA13PQ6UXR4 307 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 TAS2R42Q7RTR8 314 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 OTOAQ7RTW8 1153 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 PIANPQ8IYJ0 282 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 RBFAQ8N0V3 343 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 FSTL5Q8N475 847 aaPredicted RBP8.59□□□□□ -1.03
TPM3-213ENST00000368545 TMIEQ8NEW7 156 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 ADAMTS14Q8WXS8 1223 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 PPP1R16AQ96I34 528 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 UBXN10Q96LJ8 280 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 TMEM245Q9H330 911 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 SYTL2Q9HCH5 934 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 THAP1Q9NVV9 213 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 GTSE1Q9NYZ3 720 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 DUSP13Q9UII6 198 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 RUVBL2Q9Y230 463 aaKnown RBP8.59□□□□□ -1.03
TPM3-213ENST00000368545 ARL2BPQ9Y2Y0 163 aa8.59□□□□□ -1.03
TPM3-213ENST00000368545 C5orf42Q9H799 3197 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 TRBV5-4A0A0C4DH59 114 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 TMEM114B3SHH9 223 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 G3V2L1 256 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 H3BMM5 538 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 H3BS24 57 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 GAPDHSO14556 408 aaPredicted RBP8.58□□□□□ -1.04
TPM3-213ENST00000368545 PRMT5O14744 637 aaPredicted RBP8.58□□□□□ -1.04
TPM3-213ENST00000368545 APOL3O95236 402 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 KAT7O95251 611 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 CTSLP07711 333 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 CCDC166P0CW27 439 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 FGF3P11487 239 aaPredicted RBP8.58□□□□□ -1.04
TPM3-213ENST00000368545 MYF5P13349 255 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 PKMP14618 531 aaKnown RBP8.58□□□□□ -1.04
TPM3-213ENST00000368545 ZNF37AP17032 561 aaPredicted RBP8.58□□□□□ -1.04
TPM3-213ENST00000368545 LHCGRP22888 699 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 ITGB7P26010 798 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 ACRV1P26436 265 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 RPL10P27635 214 aaKnown RBP8.58□□□□□ -1.04
TPM3-213ENST00000368545 CASP2P42575 452 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 DCDC1P59894 354 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 BST1Q10588 318 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 CSHL1Q14406 222 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 PTPRRQ15256 657 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 CGB2Q6NT52 195 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 ZNF549Q6P9A3 640 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 ZYG11AQ6WRX3 759 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 YTHDF3Q7Z739 585 aaKnown RBP8.58□□□□□ -1.04
TPM3-213ENST00000368545 DSG4Q86SJ6 1040 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 TSPAN33Q86UF1 283 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 C10orf107Q8IVU9 208 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 DTX3LQ8TDB6 740 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 KCNJ9Q92806 393 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 ULK4Q96C45 1275 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 NXNL1Q96CM4 212 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 CCDC126Q96EE4 140 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 GPR78Q96P69 363 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 ASB8Q9H765 288 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 IL26Q9NPH9 171 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 RIC8BQ9NVN3 520 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 NFKBIL1Q9UBC1 381 aaPredicted RBP8.58□□□□□ -1.04
TPM3-213ENST00000368545 XPR1Q9UBH6 696 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 CRLS1Q9UJA2 301 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 GNPTGQ9UJJ9 305 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 CKAP5Q14008 2032 aa8.58□□□□□ -1.04
TPM3-213ENST00000368545 FASNP49327 2511 aaKnown RBP8.57□□□□□ -1.04
TPM3-213ENST00000368545 RGSL1A5PLK6 1076 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 AGAP14A8MT82 685 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 M0R3H8 397 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 PSMD11O00231 422 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 TRIM13O60858 407 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 PRSS56P0CW18 603 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 CHRNB1P11230 501 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 RALBP11234 206 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 HSD3B1P14060 373 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 FMO4P31512 558 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms