RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 LRIG3Q6UXM1 1119 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 TRIM73Q86UV7 250 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 SRRM1Q8IYB3 904 aaKnown RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 OR4D9Q8NGE8 314 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 ACMSDQ8TDX5 336 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 ZDHHC12Q96GR4 267 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 CCDC74BQ96LY2 380 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 GPR78Q96P69 363 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 MAP3K3Q99759 626 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 ACAT2Q9BWD1 397 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 CPSF2Q9P2I0 782 aaKnown RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 ZNF839A8K0R7 811 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 HYAL3O43820 417 aaPredicted RBP13.43□□□□□ -0.26
TPM3-211ENST00000368531 ANXA5P08758 320 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 PVRP15151 417 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 KRT4P19013 534 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 RPA3P35244 121 aaPredicted RBP13.43□□□□□ -0.26
TPM3-211ENST00000368531 HSD17B2P37059 387 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 AP1S2P56377 157 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 TARDBPQ13148 414 aaKnown RBP eCLIP13.43□□□□□ -0.26
TPM3-211ENST00000368531 ARHGAP19Q14CB8 494 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 SF1Q15637 639 aaKnown RBP13.43□□□□□ -0.26
TPM3-211ENST00000368531 ISXQ2M1V0 245 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 TSNAXIP1Q2TAA8 658 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 TECRLQ5HYJ1 363 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 HDXQ7Z353 690 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 CLEC14AQ86T13 490 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 TRABD2AQ86V40 505 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 SMPDL3AQ92484 453 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 ESAMQ96AP7 390 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 PYCR2Q96C36 320 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 FBXL8Q96CD0 374 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 TMEM74Q96NL1 305 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 DEPDC7Q96QD5 511 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 OR2A14Q96R47 310 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 ATOH8Q96SQ7 321 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 DPYSL5Q9BPU6 564 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 WWOXQ9NZC7 414 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 TMEM216Q9P0N5 145 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 XPR1Q9UBH6 696 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 EPHA6Q9UF33 1036 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 POMT2Q9UKY4 750 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 KLHL20Q9Y2M5 609 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 ENTPD2Q9Y5L3 495 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 KIF26BQ2KJY2 2108 aa13.43□□□□□ -0.26
TPM3-211ENST00000368531 A0A1W2PPV9 198 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 E7ENX8 843 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 COPEO14579 308 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 KERAO60938 352 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 SPAG7O75391 227 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 C9P02748 559 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 RBP1P09455 135 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 ERGP11308 486 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 SPINK2P20155 84 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 OAS2P29728 719 aaKnown RBP13.42□□□□□ -0.26
TPM3-211ENST00000368531 LSSP48449 732 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 PDX1P52945 283 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 TBPL1P62380 186 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 YBX1P67809 324 aaKnown RBP13.42□□□□□ -0.26
TPM3-211ENST00000368531 TAP2Q03519 686 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 ZFP36L1Q07352 338 aaKnown RBP13.42□□□□□ -0.26
TPM3-211ENST00000368531 KIR2DS3Q14952 304 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 CLPPQ16740 277 aaPredicted RBP13.42□□□□□ -0.26
TPM3-211ENST00000368531 ZXDCQ2QGD7 858 aaPredicted RBP13.42□□□□□ -0.26
TPM3-211ENST00000368531 FOXR1Q6PIV2 292 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 SPESP1Q6UW49 350 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 SH2D5Q6ZV89 423 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 RAB44Q7Z6P3 723 aaPredicted RBP13.42□□□□□ -0.26
TPM3-211ENST00000368531 CROCCP2Q86T23 111 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 TMPRSS12Q86WS5 348 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 SLITRK4Q8IW52 837 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 HMGCLL1Q8TB92 370 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 MIPEPQ99797 713 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 RAB33BQ9H082 229 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 C12orf65Q9H3J6 166 aaKnown RBP13.42□□□□□ -0.26
TPM3-211ENST00000368531 CCDC177Q9NQR7 707 aaPredicted RBP13.42□□□□□ -0.26
TPM3-211ENST00000368531 TAC3Q9UHF0 121 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 DCDC2Q9UHG0 476 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 PCDHB11Q9Y5F2 797 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
TPM3-211ENST00000368531 MN1Q10571 1320 aaPredicted RBP13.41□□□□□ -0.26
TPM3-211ENST00000368531 WDR87Q6ZQQ6 2873 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 IGHV5-51A0A0C4DH38 117 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 TLCD2A6NGC4 264 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 SLC9B1P1A6NJY1 282 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 SYCE1LA8MT33 242 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 TK2O00142 265 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 MATN2O00339 956 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 TAPBPO15533 448 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 PRICKLE3O43900 615 aaPredicted RBP13.41□□□□□ -0.26
TPM3-211ENST00000368531 PRAMEF10O60809 474 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 GLRA3O75311 464 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 MYZAPP0CAP1 466 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 THRAP10827 490 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 GFAPP14136 432 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 CREB1P16220 341 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 GDF5P43026 501 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 HSPA7P48741 367 aa13.41□□□□□ -0.26
TPM3-211ENST00000368531 ARL4DP49703 201 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms