RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CYP2A13Q16696 494 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 CMC1Q7Z7K0 106 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 KMT5CQ86Y97 462 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 CARFQ8N187 725 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 D2HGDHQ8N465 521 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 HMGCLL1Q8TB92 370 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZNF480Q8WV37 535 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 NAF1Q96HR8 494 aaKnown RBP14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 TXLNGYQ9BZA5 131 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 UNKQ9C0B0 810 aaKnown RBP14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 GPAMQ9HCL2 828 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 FBXO8Q9NRD0 319 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 BTRCQ9Y297 605 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 KLHL20Q9Y2M5 609 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZZEF1O43149 2961 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ANKRD12Q6UB98 2062 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 A0A0J9YY10 115 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 HMX2A2RU54 273 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 C8GP07360 202 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 MAP4P27816 1152 aaKnown RBP14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ARL4DP49703 201 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 PMS2P54278 862 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC12A2P55011 1212 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 YBX1P67809 324 aaKnown RBP14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 GPR19Q15760 415 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZKSCAN8Q15776 578 aaPredicted RBP14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZIC1Q15915 447 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ST3GAL2Q16842 350 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 SUSD1Q6UWL2 747 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZFAND4Q86XD8 727 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 RAB42Q8N4Z0 105 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 OR2W6PQ8NHA6 318 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 DCBLD2Q96PD2 775 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 DDA1Q9BW61 102 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC12A9Q9BXP2 914 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 POPDC3Q9HBV1 291 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 PCDHGA3Q9Y5H0 932 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 NPEPPSL1A6NEC2 478 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 CDC7O00311 574 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 POLR1CO15160 346 aaPredicted RBP14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 IMPA1P29218 277 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 PNLIPRP1P54315 467 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 PCBP4P57723 403 aaKnown RBP14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 RAB15P59190 212 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 SP140Q13342 867 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 TUBB3Q13509 450 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC5A12Q1EHB4 618 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 DCAF12Q5T6F0 453 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 SBSNQ6UWP8 590 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 LRRC56Q8IYG6 542 aaPredicted RBP14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 SPATA6LQ8N4H0 392 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 C19orf47Q8N9M1 422 aaKnown RBP14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 PDLIM5Q96HC4 596 aaKnown RBP14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZIM3Q96PE6 472 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 RUFY1Q96T51 708 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 EPB41L4BQ9H329 900 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 ACBD3Q9H3P7 528 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 FAM60AQ9NP50 221 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 LNPEPQ9UIQ6 1025 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 PLAAQ9Y263 795 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 USP24Q9UPU5 2620 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 APC2O95996 2303 aa14.54□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC16A5O15375 505 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 RIPK2O43353 540 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 HCRTR1O43613 425 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 TIAF1O95411 115 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 STMN1P16949 149 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZNF28P17035 718 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 CYP2A7P20853 494 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 MAGP20916 626 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 OAS2P29728 719 aaKnown RBP14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 EIF2S3P41091 472 aaKnown RBP14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 ILF2Q12905 390 aaKnown RBP14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 TSTA3Q13630 321 aaPredicted RBP14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 TMEM164Q5U3C3 297 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 KIAA1614Q5VZ46 1190 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 CEACAM20Q6UY09 585 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 CDHR3Q6ZTQ4 885 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 MREGQ8N565 214 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 NKAPQ8N5F7 415 aaKnown RBP14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 OR2A1Q8NGT9 310 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 TSPAN17Q96FV3 270 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 PAFAH2Q99487 392 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 MIPEPQ99797 713 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 ACAT2Q9BWD1 397 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 VIPAS39Q9H9C1 493 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 PARVBQ9HBI1 364 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 SYTL2Q9HCH5 934 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 FGF21Q9NSA1 209 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 STOX2Q9P2F5 926 aaPredicted RBP14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 ACSL6Q9UKU0 697 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 PCM1Q15154 2024 aa14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 TPRP12270 2363 aaKnown RBP14.53□□□□□ -0.08
SMPDL3A-201ENST00000368440 A0A087WUV0 522 aaPredicted RBP14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 SRRM3A6NNA2 597 aaPredicted RBP14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 E7ENX8 843 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 POC1B-GALNT4F8VUJ3 575 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 NRP2O60462 931 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 RAB10P61026 200 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 TAP2Q03519 686 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms