RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CHST8Q9H2A9 424 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 ACTL8Q9H568 366 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 SPATA7Q9P0W8 599 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 TEX264Q9Y6I9 313 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 MYO1CO00159 1063 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 PTPN4P29074 926 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 RPL21P46778 160 aaKnown RBP18.23■□□□□ 0.51
CKS1B-203ENST00000368439 GCGRP47871 477 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 ETF1P62495 437 aaKnown RBP18.23■□□□□ 0.51
CKS1B-203ENST00000368439 CBLBQ13191 982 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 CUL1Q13616 776 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 ERV3-1Q14264 604 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 FASTKQ14296 549 aaKnown RBP18.23■□□□□ 0.51
CKS1B-203ENST00000368439 HP1BP3Q5SSJ5 553 aaPredicted RBP18.23■□□□□ 0.51
CKS1B-203ENST00000368439 STEAP4Q687X5 459 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 PDIK1LQ8N165 341 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 OR2A1Q8NGT9 310 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 OR9A1PQ8NGU1 263 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 MAGEC3Q8TD91 643 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 INPP5DQ92835 1189 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 CLIP3Q96DZ5 547 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 CERS2Q96G23 380 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 TRIM31Q9BZY9 425 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 GEMIN8Q9NWZ8 242 aaKnown RBP18.23■□□□□ 0.51
CKS1B-203ENST00000368439 SLC17A6Q9P2U8 582 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 CHMP2BQ9UQN3 213 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 ZNF462Q96JM2 2506 aa18.23■□□□□ 0.51
CKS1B-203ENST00000368439 HEATR5BQ9P2D3 2071 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 EFCAB8A8MWE9 144 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 OR2B3O76000 313 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 FKBP9O95302 570 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 AHSGP02765 367 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 KLK3P07288 261 aaPredicted RBP18.22■□□□□ 0.51
CKS1B-203ENST00000368439 MPC1LP0DKB6 136 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 PSMB5P28074 263 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 POLE2P56282 527 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 RPS18P62269 152 aaKnown RBP18.22■□□□□ 0.51
CKS1B-203ENST00000368439 MRPS25P82663 173 aaKnown RBP18.22■□□□□ 0.51
CKS1B-203ENST00000368439 SF1Q15637 639 aaKnown RBP18.22■□□□□ 0.51
CKS1B-203ENST00000368439 DEFB109BQ30KR1 87 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 TTLL9Q3SXZ7 439 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 TEDDM1Q5T9Z0 273 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 FAM198BQ6UWH4 519 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 SYTL1Q8IYJ3 562 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 FBXO15Q8NCQ5 510 aaPredicted RBP18.22■□□□□ 0.51
CKS1B-203ENST00000368439 SPATA4Q8NEY3 305 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 ASB11Q8WXH4 323 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 LRRC39Q96DD0 335 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 CCDC68Q9H2F9 335 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 ADNPQ9H2P0 1102 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 ENAMQ9NRM1 1142 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 STARD5Q9NSY2 213 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 EURLQ9NYK6 297 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 PLCL2Q9UPR0 1127 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 FARSAQ9Y285 508 aaKnown RBP18.22■□□□□ 0.51
CKS1B-203ENST00000368439 SNX24Q9Y343 169 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 KLK4Q9Y5K2 254 aa18.22■□□□□ 0.51
CKS1B-203ENST00000368439 E7ESA3 106 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 GFYI3L273 518 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 RAB40ALP0C0E4 278 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 GRIA3P42263 894 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 CCR10P46092 362 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 CARSP49589 748 aaKnown RBP18.21■□□□□ 0.51
CKS1B-203ENST00000368439 YBX1P67809 324 aaKnown RBP18.21■□□□□ 0.51
CKS1B-203ENST00000368439 HIF1AQ16665 826 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 PTCHD3Q3KNS1 767 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 RHBDD2Q6NTF9 364 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 TRMT10BQ6PF06 316 aaKnown RBP18.21■□□□□ 0.51
CKS1B-203ENST00000368439 FIGLAQ6QHK4 219 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 SYT10Q6XYQ8 523 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 KIAA0408Q6ZU52 694 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 GALNT7Q86SF2 657 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 CPNE9Q8IYJ1 553 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 GPR135Q8IZ08 494 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 ZUFSPQ96AP4 578 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 PKP4Q99569 1192 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 NDNQ99608 321 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 FAM117AQ9C073 453 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.21■□□□□ 0.51
CKS1B-203ENST00000368439 ZC3H7BQ9UGR2 993 aaKnown RBP18.21■□□□□ 0.51
CKS1B-203ENST00000368439 KCNMB2Q9Y691 235 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 AP1M2Q9Y6Q5 423 aa18.21■□□□□ 0.51
CKS1B-203ENST00000368439 ANKRD12Q6UB98 2062 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 CDC14CA4D256 554 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 TARM1B6A8C7 271 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 CATP04040 527 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 HBQ1P09105 142 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 CBSLP0DN79 551 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 ENO3P13929 434 aaPredicted RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 CASQ1P31415 396 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 CBSP35520 551 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 ARL4CP56559 192 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 RPS15P62841 145 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 IL10RAQ13651 578 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 FRG1Q14331 258 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 FASTKD3Q14CZ7 662 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 UGT8Q16880 541 aa18.2■□□□□ 0.5
CKS1B-203ENST00000368439 RBM20Q5T481 1227 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 PIWIL4Q7Z3Z4 852 aaKnown RBP18.2■□□□□ 0.5
CKS1B-203ENST00000368439 SYVN1Q86TM6 617 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms